Structure of PDB 2tbv Chain C Binding Site BS03

Receptor Information
>2tbv Chain C (length=321) Species: 12145 (Tomato bushy stunt virus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
IITHVGGVGGSIMAPVAVSRQLVGSKPKFTGRTSGGVTVTSHREYLTQVN
NSSGFVVNGGIVGNSLQLNPSNGTLFSWLPALASNFDQYSFNSVVLDYVP
LCGTTEVGRVALYFDKDSQDPEPADRVELANFGVLKETAPWAEAMLRIPT
DKVKRYCNDSATVDQKLIDLGQLGIATYGGAGADAVGELFLARSVTLYFP
QPTNTLLSSKRLDLTGSLADATGPGYLVLTRTPTVLTHTFRATGTFNLSG
GLRCLTSLTLGATGAVVINDILAIDNVGTASDYFLNCTVSSLPATVTFTV
SGVAAGILLVGRARANVVNLL
Ligand information
Ligand IDCA
InChIInChI=1S/Ca/q+2
InChIKeyBHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Ca+2]
FormulaCa
NameCALCIUM ION
ChEMBL
DrugBankDB14577
ZINC
PDB chain2tbv Chain C Residue 389 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB2tbv Structure of tomato bushy stunt virus. V. Coat protein sequence determination and its structural implications
Resolution2.9 Å
Binding residue
(original residue number in PDB)		D153 D225
Binding residue
(residue number reindexed from 1)		D87 D159
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0005198 structural molecule activity
Cellular Component
GO:0019028 viral capsid

View graph for
Molecular Function
View graph for
Cellular Component
External links
PDB RCSB:2tbv, PDBe:2tbv, PDBj:2tbv
PDBsum2tbv
PubMed6481803
UniProtP11795|CAPSD_TBSVB Capsid protein (Gene Name=ORF2)

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