Structure of PDB 1p84 Chain C Binding Site BS03

Receptor Information
>1p84 Chain C (length=385) Species: 4932 (Saccharomyces cerevisiae) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MAFRKSNVYLSLVNSYIIDSPQPSSINYWWNMGSLLGLCLVIQIVTGIFM
AMHYSSNIELAFSSVEHIMRDVHNGYILRYLHANGASFFFMVMFMHMAKG
LYYGSYRSPRVTLWNVGVIIFTLTIATAFLGYCCVYGQMSHWGATVITNL
FSAIPFVGNDIVSWLWGGFSVSNPTIQRFFALHYLVPFIIAAMVIMHLMA
LHIHGSSNPLGITGNLDRIPMHSYFIFKDLVTVFLFMLILALFVFYSPNT
LGHPDNYIPGNPLVTPASIVPEWYLLPFYAILRSIPDKLLGVITMFAAIL
VLLVLPFTDRSVVRGNTFKVLSKFFFFIFVFNFVLLGQIGACHVEVPYVL
MGQIATFIYFAYFLIIVPVISTIENVLFYIGRVNK
Ligand information
Ligand IDDBT
InChIInChI=1S/C14H17NO3S/c1-2-3-4-5-6-7-9-11(16)10-14(19-8-15-10)13(18)12(9)17/h8,17H,2-7H2,1H3
InChIKeyCAPIRLKYURUNFL-UHFFFAOYSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.5.0CCCCCCCC1=C(C(=O)c2c(ncs2)C1=O)O
ACDLabs 10.04O=C2c1scnc1C(=O)C(=C2O)CCCCCCC
CACTVS 3.341CCCCCCCC1=C(O)C(=O)c2scnc2C1=O
FormulaC14 H17 N O3 S
Name5-HEPTYL-6-HYDROXY-1,3-BENZOTHIAZOLE-4,7-DIONE
ChEMBL
DrugBank
ZINCZINC000053683118
PDB chain1p84 Chain C Residue 705 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB1p84 Structure of the yeast cytochrome bc1 complex with a hydroxyquinone anion Qo site inhibitor bound
Resolution2.5 Å
Binding residue
(original residue number in PDB)		W142 G143 V146 I269 P271 Y279
Binding residue
(residue number reindexed from 1)		W142 G143 V146 I269 P271 Y279
Annotation score1
Enzymatic activity
Catalytic site (original residue number in PDB) H202 S206 K228 D229 E272
Catalytic site (residue number reindexed from 1) H202 S206 K228 D229 E272
Enzyme Commision number 7.1.1.8: quinol--cytochrome-c reductase.
Gene Ontology
Molecular Function
GO:0008121 ubiquinol-cytochrome-c reductase activity
GO:0009055 electron transfer activity
GO:0016491 oxidoreductase activity
GO:0046872 metal ion binding
Biological Process
GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c
GO:0009060 aerobic respiration
GO:0022904 respiratory electron transport chain
GO:0045333 cellular respiration
GO:1902600 proton transmembrane transport
Cellular Component
GO:0005739 mitochondrion
GO:0005743 mitochondrial inner membrane
GO:0016020 membrane
GO:0045275 respiratory chain complex III

View graph for
Molecular Function
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Biological Process
View graph for
Cellular Component
External links
PDB RCSB:1p84, PDBe:1p84, PDBj:1p84
PDBsum1p84
PubMed12782631
UniProtP00163|CYB_YEAST Cytochrome b (Gene Name=COB)

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