Structure of PDB 1oq4 Chain C Binding Site BS03
Receptor Information
>1oq4 Chain C (length=346) Species:
3988
(Ricinus communis) [
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FMPPREVHVQVTHSMPPQKIEIFKSLDNWAEENILVHLKPVEKCWQPQDF
LPDPASDGFDEQVRELRERAKEIPDDYFVVLVGDMITEEALPTYQTMLNT
LDGVRDETGASPTSWAIWTRAWTAEENRHGDLLNKYLYLSGRVDMRQIEK
TIQYLIGSGMDPRTENSPYLGFIYTSFQERATFISHGNTARQAKEHGDIK
LAQICGTIAADEKRHETAYTKIVEKLFEIDPDGTVLAFADMMRKKISMPA
HLMYDGRDDNLFDHFSAVAQRLGVYTAKDYADILEFLVGRWKVDKLTGLS
AEGQKAQDYVCRLPPRIRRLEERAQGRAKEAPTMPFSWIFDRQVKL
Ligand information
Ligand ID
AZI
InChI
InChI=1S/N3/c1-3-2/q-1
InChIKey
IVRMZWNICZWHMI-UHFFFAOYSA-N
SMILES
Software
SMILES
ACDLabs 10.04
CACTVS 3.341
OpenEye OEToolkits 1.5.0
[N-]=[N+]=[N-]
Formula
N3
Name
AZIDE ION
ChEMBL
CHEMBL79455
DrugBank
ZINC
PDB chain
1oq4 Chain C Residue 2366 [
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Receptor-Ligand Complex Structure
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PDB
1oq4
Azide and acetate complexes plus two iron-depleted crystal structures of the di-iron enzyme delta 9 stearoyl-ACP desaturase- implications for oxygen activation and catalytic intermediates.
Resolution
2.4 Å
Binding residue
(original residue number in PDB)
E143 E196
Binding residue
(residue number reindexed from 1)
E126 E179
Annotation score
1
Enzymatic activity
Catalytic site (original residue number in PDB)
W62 E105 E143 H146 E196 T199 D228 E229 H232
Catalytic site (residue number reindexed from 1)
W45 E88 E126 H129 E179 T182 D211 E212 H215
Enzyme Commision number
1.14.19.2
: stearoyl-[acyl-carrier-protein] 9-desaturase.
Gene Ontology
Molecular Function
GO:0005515
protein binding
GO:0016491
oxidoreductase activity
GO:0045300
stearoyl-[ACP] desaturase activity
GO:0046872
metal ion binding
Biological Process
GO:0006631
fatty acid metabolic process
GO:0006633
fatty acid biosynthetic process
Cellular Component
GO:0009507
chloroplast
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Cellular Component
External links
PDB
RCSB:1oq4
,
PDBe:1oq4
,
PDBj:1oq4
PDBsum
1oq4
PubMed
12704186
UniProt
P22337
|STAD_RICCO Stearoyl-[acyl-carrier-protein] 9-desaturase, chloroplastic
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