Structure of PDB 5aj0 Chain Ba Binding Site BS03
Receptor Information
>5aj0 Chain Ba (length=97) Species:
9606
(Homo sapiens) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
TKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVR
DISEASVFDAYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPP
Ligand information
Ligand ID
ZN
InChI
InChI=1S/Zn/q+2
InChIKey
PTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
Software
SMILES
CACTVS 3.341
[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Zn+2]
Formula
Zn
Name
ZINC ION
ChEMBL
CHEMBL1236970
DrugBank
DB14532
ZINC
PDB chain
5aj0 Chain Ba Residue 201 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
5aj0
Structural Snapshots of Actively Translating Human Ribosomes
Resolution
3.5 Å
Binding residue
(original residue number in PDB)
C23 C77
Binding residue
(residue number reindexed from 1)
C22 C76
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003723
RNA binding
GO:0003729
mRNA binding
GO:0003735
structural constituent of ribosome
GO:0005515
protein binding
GO:0045296
cadherin binding
Biological Process
GO:0002181
cytoplasmic translation
GO:0006412
translation
GO:0033119
negative regulation of RNA splicing
Cellular Component
GO:0005654
nucleoplasm
GO:0005737
cytoplasm
GO:0005783
endoplasmic reticulum
GO:0005791
rough endoplasmic reticulum
GO:0005829
cytosol
GO:0005840
ribosome
GO:0015935
small ribosomal subunit
GO:0016020
membrane
GO:0022626
cytosolic ribosome
GO:0022627
cytosolic small ribosomal subunit
GO:0045202
synapse
GO:0070062
extracellular exosome
GO:0098556
cytoplasmic side of rough endoplasmic reticulum membrane
GO:1990904
ribonucleoprotein complex
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:5aj0
,
PDBe:5aj0
,
PDBj:5aj0
PDBsum
5aj0
PubMed
25957688
UniProt
P62854
|RS26_HUMAN Small ribosomal subunit protein eS26 (Gene Name=RPS26)
[
Back to BioLiP
]