Structure of PDB 8wg2 Chain B Binding Site BS03

Receptor Information
>8wg2 Chain B (length=681) Species: 376686 (Flavobacterium johnsoniae UW101) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SDLKSPDGNFLMHFSLEADGTPVYKLIYKGKDVIKASKLGFTLKNDNKSL
LNDFKIEDTKTSSFDENWKPVWGEVSSIRNNYNELAVSLSQKETDRKMII
RFRLFDDGLGFRYEFPQQNNLIYFTIKEERTQFAMAGDHTAYWIPGDYDT
QEYNYSTSKLSEIRGLMEKAYTKGNASQTSFSPTGVQTSLMMKSQDGLYI
NLHEAALINYSCMHLNLDDKNFVFESWLTPDSHGDKGKMQAPCKTPWRTV
IVSDDARNILASKLTYNLNEPSKIQETSWIKPTKYVGVWWEMISGKSTWS
YTDEFPSVQLGVTDFSKAKPNRKHGATTANVKRYIDFAAKNGFDAVLVEG
WNEGWEDWIGHEKDYVFDFVTPYPDFDIKGLNEYAHAKKVKLIMHHETSG
AVRNYERHMDAAYKLMKQYGYDAVKSGYVGNILPLGETHYSQWTNNHYQY
AIEKAADYQIMVNAHEAVRPTGIARTYPNLIGNEAARGTQYQAFGNDRNN
ANHVTILPFTRLIGGPMDYTPGIFEMDVTNGSHVNATIANQLALYVTMYS
PLQMAADFPENYERFADAFQFIKDVAVDWDDSRYLEAEPGQYITVARKAK
GTDNWFLGNVNGETARVSNIDLGFLEKGKKYTAVIYADAKDANYKTNTQA
YTIRKVVVTSNSKLSQFSASGGGYAISFYPV
Ligand information
Ligand IDCA
InChIInChI=1S/Ca/q+2
InChIKeyBHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Ca+2]
FormulaCa
NameCALCIUM ION
ChEMBL
DrugBankDB14577
ZINC
PDB chain8wg2 Chain B Residue 800 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB8wg2 Structural insights into alpha-(1->6)-linkage preference of GH97 glucodextranase from Flavobacterium johnsoniae.
Resolution2.45 Å
Binding residue
(original residue number in PDB)		E171 E485 E503 Q509
Binding residue
(residue number reindexed from 1)		E152 E466 E484 Q490
Annotation score4
Enzymatic activity
Enzyme Commision number 3.2.1.70: glucan 1,6-alpha-glucosidase.
Gene Ontology
Molecular Function
GO:0016787 hydrolase activity
GO:0030246 carbohydrate binding
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:8wg2, PDBe:8wg2, PDBj:8wg2
PDBsum8wg2
PubMed38661728
UniProtA5FBI0

[Back to BioLiP]