Structure of PDB 8vzr Chain B Binding Site BS03
Receptor Information
>8vzr Chain B (length=137) Species:
129555
(Amphitrite ornata) [
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GFKQDIATIRGDLRTYAQDIFLAFLNKYPDERRYFKNYVGKSDQELKSMA
KFGDHTEKVFNLMMEVADRATDCVPLASDANTLVQMKQHSSLTTGNFEKL
FVALVEYMRASGQSFDSQSWDRFGKNLVSALSSAGMK
Ligand information
Ligand ID
OXY
InChI
InChI=1S/O2/c1-2
InChIKey
MYMOFIZGZYHOMD-UHFFFAOYSA-N
SMILES
Software
SMILES
CACTVS 3.341
OpenEye OEToolkits 1.5.0
O=O
Formula
O2
Name
OXYGEN MOLECULE
ChEMBL
CHEMBL1234886
DrugBank
DB09140
ZINC
PDB chain
8vzr Chain B Residue 208 [
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Receptor-Ligand Complex Structure
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PDB
8vzr
Structural Comparison of Substrate Binding Sites in Dehaloperoxidase A and B.
Resolution
1.64 Å
Binding residue
(original residue number in PDB)
F35 H55 V59
Binding residue
(residue number reindexed from 1)
F35 H55 V59
Annotation score
4
Gene Ontology
Molecular Function
GO:0004601
peroxidase activity
GO:0005344
oxygen carrier activity
GO:0046872
metal ion binding
Biological Process
GO:0015671
oxygen transport
GO:0098869
cellular oxidant detoxification
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Molecular Function
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Biological Process
External links
PDB
RCSB:8vzr
,
PDBe:8vzr
,
PDBj:8vzr
PDBsum
8vzr
PubMed
38959050
UniProt
Q9NAV8
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