Structure of PDB 8u0y Chain B Binding Site BS03
Receptor Information
>8u0y Chain B (length=176) Species:
193556
(Ceramium secundatum) [
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MLDAFSRVVVNSDSKAAYVGGSDLQALKTFIADGNKRLDAVNSIVSNASC
IVSDAVSGMICENPGLIAPGGNCYTNRRMAACLRDGEIILRYTSYALLAG
DSSVLEDRCLNGLKETYIALGVPTNSSVRAVSIMKSAAVAFISNTASQRK
MATTDGDCSALSSEVASYCDKVAAAI
Ligand information
Ligand ID
PUB
InChI
InChI=1S/C33H42N4O6/c1-7-20-19(6)32(42)37-27(20)14-25-18(5)23(10-12-31(40)41)29(35-25)15-28-22(9-11-30(38)39)17(4)24(34-28)13-26-16(3)21(8-2)33(43)36-26/h15,26-27,35H,7-14H2,1-6H3,(H,36,43)(H,37,42)(H,38,39)(H,40,41)/b28-15-/t26-,27+/m1/s1
InChIKey
KDCCOOGTVSRCHX-YYVBKQGDSA-N
SMILES
Software
SMILES
CACTVS 3.341
CCC1=C(C)C(=O)N[CH]1Cc2[nH]c(C=C3N=C(C[CH]4NC(=O)C(=C4C)CC)C(=C3CCC(O)=O)C)c(CCC(O)=O)c2C
OpenEye OEToolkits 1.5.0
CCC1=C(C(=O)NC1Cc2c(c(c([nH]2)C=C3C(=C(C(=N3)CC4C(=C(C(=O)N4)CC)C)C)CCC(=O)O)CCC(=O)O)C)C
OpenEye OEToolkits 1.5.0
CCC1=C(C(=O)N[C@H]1Cc2c(c(c([nH]2)\C=C/3\C(=C(C(=N3)C[C@@H]4C(=C(C(=O)N4)CC)C)C)CCC(=O)O)CCC(=O)O)C)C
CACTVS 3.341
CCC1=C(C)C(=O)N[C@H]1Cc2[nH]c(\C=C3/N=C(C[C@H]4NC(=O)C(=C4C)CC)C(=C3CCC(O)=O)C)c(CCC(O)=O)c2C
Formula
C33 H42 N4 O6
Name
PHYCOUROBILIN
ChEMBL
DrugBank
ZINC
ZINC000040164449
PDB chain
8u0y Chain B Residue 203 [
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Receptor-Ligand Complex Structure
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PDB
8u0y
Bacterial protein cpx
Resolution
3.0 Å
Binding residue
(original residue number in PDB)
C50 D54 G58 C61 I133 A137 S147 Q148
Binding residue
(residue number reindexed from 1)
C50 D54 G58 C61 I133 A137 S147 Q148
Annotation score
4
External links
PDB
RCSB:8u0y
,
PDBe:8u0y
,
PDBj:8u0y
PDBsum
8u0y
PubMed
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