Structure of PDB 8tri Chain B Binding Site BS03

Receptor Information
>8tri Chain B (length=454) Species: 10090 (Mus musculus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SDVNDNRPVFVRPPNGTILHIKEEIPLRSNVYEVYATDNDEGLNGAVRYS
FLKTTGNRDWEYFTIDPISGLIQTAQRLDREKQAVYSLILVASDLGQPVP
YETMQPLQVALEDIDDNEPLFVRPPKGSPQYQLLTVPEHSPRGTLVGNVT
GAVDADEGPNAIVYYFIAAGDEDKNFHLQPDGRLLVLRDLDRETEATFSF
IVKASSNRSWTPPRGPSPALDLLTDLTLQEVRVVLEDINDQPPRFTKAEY
TAGVATDAKVGSELIQVLALDADIGNNSLVFYGILAIHYFRALANDSEDV
GQVFTMGSVDGILRTADLFMAYSPGYFVVDIVARDLAGHNDTAIIGIYIL
RDDQRVKIVINEIPDRVRGFEEEFIRLLSNITGAIVNTDDVQFHVDMKGR
VNFAQTELLIHVVNRDTNRILDVDRVIQMIDENKEQLRNLFRNYNVLDVQ
PAIS
Ligand information
Ligand IDCA
InChIInChI=1S/Ca/q+2
InChIKeyBHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Ca+2]
FormulaCa
NameCALCIUM ION
ChEMBL
DrugBankDB14577
ZINC
PDB chain8tri Chain B Residue 3103 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB8tri Crystal Structure of Mouse Cadherin-23 EC25-MAD28 F2894A
Resolution3.716 Å
Binding residue
(original residue number in PDB)
E2601 E2659 D2691 I2692 D2694 N2695
Binding residue
(residue number reindexed from 1)
E23 E81 D113 I114 D116 N117
Annotation score4
External links
PDB RCSB:8tri, PDBe:8tri, PDBj:8tri
PDBsum8tri
PubMed
UniProtQ99PF4|CAD23_MOUSE Cadherin-23 (Gene Name=Cdh23)

[Back to BioLiP]