Structure of PDB 8kgb Chain B Binding Site BS03

Receptor Information
>8kgb Chain B (length=244) Species: 3702,4081 [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SCSLNLQTEKLCYLMPKHIALIMDGNRRWAKDKGLEVYEGHKHIIPKLKE
ICDISSKLGIQIITAFAFSTENWKRSKEEVDFLLSLFERSLKTEFQNLAK
NNVRISIIGCKSDLPMTLQKCIALTEETTKGNKGLHLVIALNYGGYYDIL
QATKSIVNKAMNGLLDVEDINKNLFDQELESKCPNPDLLIRTGGEQRVSN
FLLWQLAYTEFYFTNTLFPDFGEEDLKEAIMNFQQRHRRFGGHT
Ligand information
Ligand IDIPE
InChIInChI=1S/C5H12O7P2/c1-5(2)3-4-11-14(9,10)12-13(6,7)8/h1,3-4H2,2H3,(H,9,10)(H2,6,7,8)
InChIKeyNUHSROFQTUXZQQ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341CC(=C)CCO[P](O)(=O)O[P](O)(O)=O
OpenEye OEToolkits 1.5.0CC(=C)CCOP(=O)(O)OP(=O)(O)O
ACDLabs 10.04O=P(OP(=O)(O)O)(OCC\C(=C)C)O
OpenEye OEToolkits 1.5.0CC(=C)CCO[P@@](=O)(O)OP(=O)(O)O
CACTVS 3.341CC(=C)CCO[P@](O)(=O)O[P](O)(O)=O
FormulaC5 H12 O7 P2
Name3-METHYLBUT-3-ENYL TRIHYDROGEN DIPHOSPHATE;
ISOPENTENYL PYROPHOSPHATE
ChEMBLCHEMBL356362
DrugBankDB04714
ZINCZINC000008215654
PDB chain8kgb Chain B Residue 403 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8kgb A versatile system for enzymatic synthesis of natural and unnatural polyisoprenoids on rubber particles
Resolution2.32 Å
Binding residue
(original residue number in PDB)		D86 G87 N88 R89 R90 H103 N134 R137
Binding residue
(residue number reindexed from 1)		D24 G25 N26 R27 R28 H41 N72 R75
Annotation score5
External links
PDB RCSB:8kgb, PDBe:8kgb, PDBj:8kgb
PDBsum8kgb
PubMed
UniProtC1K5M2|CPT1_SOLLC Dimethylallylcistransferase CPT1, chloroplastic (Gene Name=CPT1);
Q56Y11

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