Structure of PDB 8k28 Chain B Binding Site BS03

Receptor Information
>8k28 Chain B (length=246) Species: 979527 (Vibrio phage ICP1_2004_A) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MRKFIIVKNVKVDGINAKSSDITVGMPPATTFCGLGETMSIKTGIVVKAV
SYGSVKFEVRGSRFNTSVTKFAWQDRGNGGKANNNSPIQPKPLADGVFTL
CFEVEWEDCAEVLVDKVTNFINTARIAGGTIASFNKPFVKVAKDAEELAS
VKNAMMPCYVVVDCGVEVNIFEDAVNRKLQPMVNGYKKLEKIVDNKHMRD
KFTPAYLATPTYTMIGYKMVSNVDNFDQALWQYGENTKVKTIGGIY
Ligand information
>8k28 Chain P (length=59) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
cuuaaagagucaacccuuugcuuaucuucccuauuuaaauguuagcagcc
gcauaggcu
..............................................<<<.
......>>>
Receptor-Ligand Complex Structure
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PDB8k28 Structure of csy complex with long DNA State1
Resolution3.54 Å
Binding residue
(original residue number in PDB)
N16 K18 S19 P28 T30 T31 G34 L35 E37 T38 I41 T69 K70 F71 A72 Q74 K91 R125 A127 Y186 R199
Binding residue
(residue number reindexed from 1)
N16 K18 S19 P28 T30 T31 G34 L35 E37 T38 I41 T69 K70 F71 A72 Q74 K91 R125 A127 Y186 R199
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