Structure of PDB 8j1j Chain B Binding Site BS03

Receptor Information
>8j1j Chain B (length=387) Species: 1765684 (Sulfoacidibacillus thermotolerans) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MIKVYRYEIVKPLDLDWKEFGTILRQLQQETRFALNKATQLAWEWMGYSS
DYKDNHGEILGYTNVHGYAYHTIKTKAYRLNSGNLSQTIKRATDRFKAYQ
KEILRGDMSIPSYKRDIPLDLIKENISVNRMNHGDYIASLSLLSNPAKQE
MNVKRKISVIIIVRGAGKTIMDRILSGEYQVHASQIIHDDRKNKWYLNIS
YDFEPQTRVLDLNKIMGIDLGVAVAAYMAFQHTPARYKLEGGEIENFRRQ
VESRRISMLKPIEQLRDKIANFRDTTNHRYSRYIVDMAIKMGCGTIQMED
LDIGSRFLQNWTYYDLQQKIIYKAEEAGIKVIKIDPQYTSQRCSECGNID
GQAIFKCRACGYEANADYNAARNIAIPNIDKIIAESI
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain8j1j Chain B Residue 501 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB8j1j Minimal and most efficient genome editing Cas enzyme
Resolution2.91 Å
Binding residue
(original residue number in PDB)
C372 C375 C391 C394
Binding residue
(residue number reindexed from 1)
C343 C346 C357 C360
Annotation score4
Enzymatic activity
Enzyme Commision number 3.1.-.-
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0003723 RNA binding
GO:0004519 endonuclease activity
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:8j1j, PDBe:8j1j, PDBj:8j1j
PDBsum8j1j
PubMed
UniProtA0A2U3D0N8|CS12F_SULT2 CRISPR-associated endodeoxyribonuclease Cas12f1 (Gene Name=cas12f1)

[Back to BioLiP]