Structure of PDB 7oug Chain B Binding Site BS03
Receptor Information
>7oug Chain B (length=278) Species:
33747
(Simian T-lymphotropic virus 1) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
SPAKLHSFTHCGQAALTLHGATTTEALNILHSCHACRKNNPQHQMPRGHI
RRGLLPNHIWQGDITHFKYKNTLYRLHVWVDTFSGSVSATHKKRETSSEA
ISSLLHAIAHLGRPSHINTDNGPAYASQEFQHACTSLAIRHTTHIPYNPT
SSGLVERTNGILKTLLYKYFSDNPNLPMDNALSVALWTINHLNVLTHCQK
TRWQLHHSPRLPPIPEEKPVTTSKTHWYYFKIPGLNSRQWKGPQRALQEA
AGAALIPVSDTAAQWIPWKLLKRAVCPR
Ligand information
>7oug Chain K (length=21) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
actgtgtttggcgcttctctc
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
7oug
Structural basis for the inhibition of HTLV-1 integration inferred from cryo-EM deltaretroviral intasome structures.
Resolution
3.1 Å
Binding residue
(original residue number in PDB)
G50 H51 I52 R53 R54 T144 H146 I147 N150 T152 S153 G155 L156 R159 T198 R204 Q250 A252 A253 W267
Binding residue
(residue number reindexed from 1)
G48 H49 I50 R51 R52 T142 H144 I145 N148 T150 S151 G153 L154 R157 T196 R202 Q248 A250 A251 W265
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003676
nucleic acid binding
GO:0008270
zinc ion binding
Biological Process
GO:0015074
DNA integration
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:7oug
,
PDBe:7oug
,
PDBj:7oug
PDBsum
7oug
PubMed
34404793
UniProt
Q4QY51
[
Back to BioLiP
]