Structure of PDB 7nsn Chain B Binding Site BS03

Receptor Information
>7nsn Chain B (length=1224) Species: 220687 (Neobacillus novalis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SKTDFFSSFEKSDLQLTWTNTVETDANGKKMSSGIDGNVAPPPGDMKSLI
GKGPTSSYTAKTNVGWTGLGALNYSGTHLSDGRAYSYNKLYDVDILVTPA
TELSYFIAPEFTDKNHNDYSSTYVSVDLAFSDGTYLHDLKAVDQYGVGLN
PKDQGDSKYLYVNQWNTIKSTIGSVAAGKTIKRILVAYDNPKGPGAFRGS
IDDIKIDGKPVQKAFGSPIDYVNILRGTQSNGSFSRGNNFPAVAIPHGFN
FWTPTTNAGSSWIYQYHESNSVNNLPQIQAFSVSHEPSPWMGDRQTFQVM
PSASTAATPNANRDSRALEFNHANEIAQPHYYSVKFENGIRTEMTPTDHA
AMFKFTFTGATSNLIFDNVNNNGGLTIDAKSGEITGYSDVKSGLSTGATR
LFVYAAFDKPVIKSGKLTGESRNNVTGYVRFDTSKDEDKVVTMKIATSLI
SVEQAKKNLEQEIGLNDTFEGLKEKAKTEWNKKLGIIEVEGASEDQLVTL
YSNLYRLFLYPNSAFENVGTTTDPVYKYASPYSAATGQDTATTTGAKIVD
GKTYVNNGFWDTYRTAWPAYSLLTPTFAGELIDGFVQQYRDGGWIARWSS
PGFANLMPGTSSDVAFADAYLKGVTNFDVQSFYQSAIRNAEAVSPNAGTG
RKGLTTSIFDGYTNTSTGEGLAWAMDGYINDFGIANLAKALKEKGDKSDP
YYANYAADYQYFLNRAQNYVHMFNPSIEFFNGRTANGAWRSTPDNFNPAV
WGSDYTETNGWNMAFHVPQDGQGLANLYGGKEGLATKLDQFFSTSETGLF
PGSYGGTIHEMREARDVRMGMYGHSNQPSHHIAYMYDYAGQPWKTQEKVR
EALNRLYIGSAIGQGYSGDEDNGEMSAWYILSAMGFYPLKMGTPEYAIGA
PLFKKATIHLENGKSIVINAPNNSKENKYVQSMKVNGKAYAKTSILHADI
ANGAVIDFEMGSKPSKWGSGDQDILQSITPGSTDGTSLSPLPLRDVTDRL
IAAEKGAVTVSDEGNGQLLFDNTSNTQLSMKSKTPSIVYQFKEGKQNVKM
YTLTSSKASQNEDPKSWVLKGSNDGKSWSVLDQRKNETFQWRQYTRAFTI
QHPGKYSQYKLEITENAGAEVTTLAELELLGYDDVTNSYQAVYELMEQFK
QSKDLTGPMAVQLNNSLTTSLDHFKKDHKDQAIKHLEDFLKHLNNKGLQD
RISSKAKGVLSADANQLIVLLARD
Ligand information
Ligand IDCA
InChIInChI=1S/Ca/q+2
InChIKeyBHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Ca+2]
FormulaCa
NameCALCIUM ION
ChEMBL
DrugBankDB14577
ZINC
PDB chain7nsn Chain B Residue 1503 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB7nsn Structural and functional characterization of multi-domain GH92 alpha-1,2-mannosidase from Neobacillus novalis
Resolution2.29 Å
Binding residue
(original residue number in PDB)
D1182 D1185 N1209
Binding residue
(residue number reindexed from 1)
D995 D998 N1022
Annotation score4
Enzymatic activity
Enzyme Commision number 3.2.1.-
Gene Ontology
Molecular Function
GO:0030246 carbohydrate binding
Biological Process
GO:0005975 carbohydrate metabolic process

View graph for
Molecular Function

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Biological Process
External links
PDB RCSB:7nsn, PDBe:7nsn, PDBj:7nsn
PDBsum7nsn
PubMed37071393
UniProtA0A7R9KAR8

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