Structure of PDB 7bm6 Chain B Binding Site BS03

Receptor Information
>7bm6 Chain B (length=727) Species: 63186 (Zobellia galactanivorans) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
AQEHPSLILTKAGVEKIRAELGNIPIFDATLEKVKAEVDAEIALGIDTPL
PKDYSGGYTHERHKRNFFILQKAGVLYQILNDEKYALYIKDMLFQYEGMY
KDLPVHPQTRSYARGKLFWQCLNDSNWLVYVSQAYDCVYDYLSKKERKQL
EKNLFRPFADYISIENPQFYNRVHNHSTWGNAAVGMIGLVMGDEELIQRA
LYGIEDDGLPIGAKDNDGGFIKVEGQKAGFLANIDEPFSPDGYYTEGPYA
QRYAMYPFLIFAEALHNVRPQQKIFEHKDGVLLKSVNTLLSLSDADGEFF
PLNDAQKGMSYHSRELVTAVDIAYHYGNHNPQLLSIAEEQGQVLLDDSGL
AVALGIREGKSEDFQKKSIKLSDGANGDQGGVAILRYGNEAMTLVYKYAA
QGLSHGHYDKLSFSLYEKGTEILQDYGLARFVNIEQKGGGNYLKENTTWA
KQTIAHNTLVQNETSHFEGKYEVGSQHHSELYFFDASNPEVQVVSAKEQN
AYPGTEMHRTMALIKTDGFEKPFVLDILRVGSNAANQYDLPFYFKGQVMQ
TNFDFTTPKSLEPLGSDNGYQHLWSEGLGQPKGDNSQLSWLENGRFYTLT
TATNNDDELHFVRIGANDPEFNLRRDAGLIIRRKNTKNTTFVSILESHGH
YSPVSEFSVNANSSISKIELMLDTKEYTAVLIDAKSNTEQTLLILANENK
NVNKEHIIEIKGKEYRWTGPYQFIKIN
Ligand information
Ligand IDMG
InChIInChI=1S/Mg/q+2
InChIKeyJLVVSXFLKOJNIY-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Mg+2]
CACTVS 3.341[Mg++]
FormulaMg
NameMAGNESIUM ION
ChEMBL
DrugBankDB01378
ZINC
PDB chain7bm6 Chain B Residue 801 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB7bm6 Structure-function analysis of a new PL17 oligoalginate lyase from the marine bacterium Zobellia galactanivorans DsijT.
Resolution2.16 Å
Binding residue
(original residue number in PDB)		H198 N257 Y268
Binding residue
(residue number reindexed from 1)		H174 N233 Y244
Annotation score4
Enzymatic activity
Enzyme Commision number 4.2.2.3: mannuronate-specific alginate lyase.
Gene Ontology
Cellular Component
GO:0042597 periplasmic space

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Molecular Function
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Cellular Component
External links
PDB RCSB:7bm6, PDBe:7bm6, PDBj:7bm6
PDBsum7bm6
PubMed34184062
UniProtG0LCA3

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