Structure of PDB 6wt2 Chain B Binding Site BS03
Receptor Information
>6wt2 Chain B (length=221) Species:
122587
(Neisseria meningitidis Z2491) [
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MTVLDREQVLSAFKNRKSCRHYDAARKISAEDFQFILELGRLSPSSVGSE
PWQFVVVQNPEIRQAIKPFSWGMADALDTASHLVVFLAKKNARFDSPFML
ESLKRRGVTEPDAMAKSLARYQAFQADDIKILDDSRALFDWCCRQTYIAL
GNMMTGAAMAGIDSCPVEGFNYADMERVLSGQFGLFDAAEWGVSVAATFG
YRVQEIATKARRPLEETVIWA
Ligand information
Ligand ID
FMN
InChI
InChI=1S/C17H21N4O9P/c1-7-3-9-10(4-8(7)2)21(15-13(18-9)16(25)20-17(26)19-15)5-11(22)14(24)12(23)6-30-31(27,28)29/h3-4,11-12,14,22-24H,5-6H2,1-2H3,(H,20,25,26)(H2,27,28,29)/t11-,12+,14-/m0/s1
InChIKey
FVTCRASFADXXNN-SCRDCRAPSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.7.6
Cc1cc2c(cc1C)N(C3=NC(=O)NC(=O)C3=N2)CC(C(C(COP(=O)(O)O)O)O)O
OpenEye OEToolkits 1.7.6
Cc1cc2c(cc1C)N(C3=NC(=O)NC(=O)C3=N2)C[C@@H]([C@@H]([C@@H](COP(=O)(O)O)O)O)O
ACDLabs 12.01
N=2C(=O)NC(=O)C3=Nc1cc(C)c(C)cc1N(C=23)CC(O)C(O)C(O)COP(=O)(O)O
CACTVS 3.385
Cc1cc2N=C3C(=O)NC(=O)N=C3N(C[CH](O)[CH](O)[CH](O)CO[P](O)(O)=O)c2cc1C
CACTVS 3.385
Cc1cc2N=C3C(=O)NC(=O)N=C3N(C[C@H](O)[C@H](O)[C@H](O)CO[P](O)(O)=O)c2cc1C
Formula
C17 H21 N4 O9 P
Name
FLAVIN MONONUCLEOTIDE;
RIBOFLAVIN MONOPHOSPHATE
ChEMBL
CHEMBL1201794
DrugBank
DB03247
ZINC
ZINC000003831425
PDB chain
6wt2 Chain B Residue 304 [
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Receptor-Ligand Complex Structure
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PDB
6wt2
Crystal Structure of Putative NAD(P)H-Flavin Oxidoreductase from Neisseria meningitidis
Resolution
1.75 Å
Binding residue
(original residue number in PDB)
R16 S18 R20 G72 C165 P166 V167 E168 G169 K209 R211
Binding residue
(residue number reindexed from 1)
R16 S18 R20 G72 C165 P166 V167 E168 G169 K209 R211
Annotation score
4
Enzymatic activity
Catalytic site (original residue number in PDB)
R20 A76 E168
Catalytic site (residue number reindexed from 1)
R20 A76 E168
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0000166
nucleotide binding
GO:0016491
oxidoreductase activity
Biological Process
GO:0046256
2,4,6-trinitrotoluene catabolic process
Cellular Component
GO:0005829
cytosol
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Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:6wt2
,
PDBe:6wt2
,
PDBj:6wt2
PDBsum
6wt2
PubMed
35195438
UniProt
A0A0U1RIB4
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