Structure of PDB 6rl0 Chain B Binding Site BS03

Receptor Information
>6rl0 Chain B (length=584) Species: 316 (Stutzerimonas stutzeri) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
ESKQKIHVGPGELDDYYGFWSGGHQGEVRVLGVPSMRELMRIPVFNVDSA
TGWGLTNESRHIMGDSAKFLNGDCHHPHISMTDGKYDGKYLFINDKANSR
VARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKYVFANAEFIIPHPND
GKVFDLQDENSYTMYNAIDAETMEMAFQVIVDGNLDNTDADYTGRFAAAT
CYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLGDSKTPVLD
GRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDK
LPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNAYTTLFIDSQVVKW
NMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALSK
FSKDRFLPVGPLHPENDQLIDISGDEMKLVHDGPTFAEPHDCIMARRDQI
KTKKIWDRNDPFFAPTVEMAKKDGINLDTDNKVIRDGNKVRVYMTSMAPA
FGVQEFTVKQGDEVTVTITNIDQIEDVSHGFVVVNHGVSMEISPQQTSSI
TFVADKPGLHWYYCSWFCHALHMEMVGRMMVEPA
Ligand information
Ligand IDCUA
InChIInChI=1S/2Cu
InChIKeyALKZAGKDWUSJED-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
CACTVS 3.341
OpenEye OEToolkits 1.5.0		[Cu][Cu]
FormulaCu2
NameDINUCLEAR COPPER ION
ChEMBL
DrugBank
ZINC
PDB chain6rl0 Chain B Residue 705 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB6rl0 Functional assembly of nitrous oxide reductase provides insights into copper site maturation.
Resolution1.78 Å
Binding residue
(original residue number in PDB)		C618 W620 C622 H626 M629
Binding residue
(residue number reindexed from 1)		C564 W566 C568 H572 M575
Annotation score1
Enzymatic activity
Enzyme Commision number 1.7.2.4: nitrous-oxide reductase.
Gene Ontology
Molecular Function
GO:0004129 cytochrome-c oxidase activity
GO:0005507 copper ion binding
GO:0005509 calcium ion binding
GO:0050304 nitrous-oxide reductase activity
Cellular Component
GO:0016020 membrane

View graph for
Molecular Function
View graph for
Cellular Component
External links
PDB RCSB:6rl0, PDBe:6rl0, PDBj:6rl0
PDBsum6rl0
PubMed31189605
UniProtP19573|NOSZ_STUST Nitrous-oxide reductase (Gene Name=nosZ)

[Back to BioLiP]