Structure of PDB 6pt8 Chain B Binding Site BS03

Receptor Information
>6pt8 Chain B (length=349) Species: 243232 (Methanocaldococcus jannaschii DSM 2661) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MSIIAINENGFLDKIKGRNPLFTCVISSIETTLSIPISGVHRDVIKYTPS
ADVELVFYGKSLTLKTPPIDATGSPTPATITRACVELKNIKNLHIDAGAF
VKPKIPFIEIDEKPTGRIEEGKAMNNSKELYMKGYLLGKNLDAELLIVGE
SVPGGTTTALGVLLGLGYDAEGKVSSGSINNPHELKIKVVREGLKKAGIN
EKSSVFDVLNAVGDKMMPVVAGLAISFAERNKPVILAGGTQMSAVLAVIK
EINKKVLDKNLIAIGTTEFVLNDKKGDLKGIVEQIGNVPVLASKFYFEKA
KIEGLKNYCKGSVKEGVGAGGIAVYSIVNDLEPTKIREFIENKFYEWYK
Ligand information
Ligand IDPO4
InChIInChI=1S/H3O4P/c1-5(2,3)4/h(H3,1,2,3,4)/p-3
InChIKeyNBIIXXVUZAFLBC-UHFFFAOYSA-K
SMILES
SoftwareSMILES
CACTVS 3.341[O-][P]([O-])([O-])=O
ACDLabs 10.04[O-]P([O-])([O-])=O
OpenEye OEToolkits 1.5.0[O-]P(=O)([O-])[O-]
FormulaO4 P
NamePHOSPHATE ION
ChEMBL
DrugBankDB14523
ZINC
PDB chain6pt8 Chain B Residue 403 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6pt8 Structural Studies of a Phosphoribosyltransferase Involved in Cobamide Biosynthesis in Methanogenic Archaea
Resolution1.4 Å
Binding residue
(original residue number in PDB)		R230 K232
Binding residue
(residue number reindexed from 1)		R230 K232
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0008939 nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity

View graph for
Molecular Function
External links
PDB RCSB:6pt8, PDBe:6pt8, PDBj:6pt8
PDBsum6pt8
PubMed36229494
UniProtQ58993|Y1598_METJA UPF0284 protein MJ1598 (Gene Name=MJ1598)

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