Structure of PDB 6ora Chain B Binding Site BS03
Receptor Information
>6ora Chain B (length=298) Species:
70601
(Pyrococcus horikoshii OT3) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
DLVEEILRLKEERNAIILAHNYQLPEVQDIADFIGDSLELARRATRVDAD
VIVFAGVDFMAETAKILNPDKVVLIPSREATCAMANMLKVEHILEAKRKY
PNAPVVLYVNSTAEAKAYADVTVTSANAVEVVKKLDSDVVIFGPDKNLAH
YVAKMTGKKIIPVPSKGHCYVHQKFTLDDVERAKKLHPNAKLMIHPQCIP
EVQEKADIIASTGGMIKRACEWDEWVVFTEREMVYRLRKLYPQKKFYPAR
EDAFCIGMKAITLKNIYESLKDMKYKVEVPEEIARKARKAIERMLEMS
Ligand information
Ligand ID
CL
InChI
InChI=1S/ClH/h1H/p-1
InChIKey
VEXZGXHMUGYJMC-UHFFFAOYSA-M
SMILES
Software
SMILES
ACDLabs 10.04
CACTVS 3.341
OpenEye OEToolkits 1.5.0
[Cl-]
Formula
Cl
Name
CHLORIDE ION
ChEMBL
DrugBank
DB14547
ZINC
PDB chain
6ora Chain B Residue 404 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
6ora
An Unexpected Species Determined by X-ray Crystallography that May Represent an Intermediate in the Reaction Catalyzed by Quinolinate Synthase.
Resolution
2.2 Å
Binding residue
(original residue number in PDB)
R44 V48
Binding residue
(residue number reindexed from 1)
R43 V47
Annotation score
1
Enzymatic activity
Enzyme Commision number
2.5.1.72
: quinolinate synthase.
Gene Ontology
Molecular Function
GO:0008987
quinolinate synthetase A activity
GO:0016740
transferase activity
GO:0016765
transferase activity, transferring alkyl or aryl (other than methyl) groups
GO:0046872
metal ion binding
GO:0051539
4 iron, 4 sulfur cluster binding
Biological Process
GO:0009435
NAD biosynthetic process
GO:0019363
pyridine nucleotide biosynthetic process
GO:0019805
quinolinate biosynthetic process
GO:0034628
'de novo' NAD biosynthetic process from aspartate
Cellular Component
GO:0005737
cytoplasm
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:6ora
,
PDBe:6ora
,
PDBj:6ora
PDBsum
6ora
PubMed
31390192
UniProt
O57767
|NADA_PYRHO Quinolinate synthase (Gene Name=nadA)
[
Back to BioLiP
]