Structure of PDB 6kvw Chain B Binding Site BS03

Receptor Information
>6kvw Chain B (length=431) Species: 1092 (Chlorobium limicola) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
KHKNMYDHTEITTDSLLALLGSEKVKIIDVRSADAYNGWRMRGEVRGGHI
KGAKSLPAKWLTDPEWLNIVRFKQIRPEDAIVLYGYTPEECEQTATRFKE
NGYNNVSVFHRFHPDWTGNDAFPMDRLEQYNRLVPAEWVNGLISGEEIPE
YDNDTFIVCHAHYRNRDAYLSGHIPGATDMDTLALESPETWNRRTPEELK
KALEEHGITASTTVVLYGKFMHPDNADEFPGSAAGHIGAIRLAFIMMYAG
VEDVRVLNGGYQSWTDAGFAISKDDVPKTTVPEFGAPIPSRPEFAVDIDE
AKEMLQSEDSDLVAVRSYPEYIGEVSGYNYIKKKGRIPGAIFAEAGSDAY
HMENYRNHDHTTREYHEIEDIWAKSGIIPKKHLAFYCGTGWRGSEAWFNA
LLMGWPRVSVYDGGWFEWSNDPENPYETGVP
Ligand information
Ligand IDAVJ
InChIInChI=1S/C9H15N3O2/c1-12(2,3)8(9(13)14)4-7-5-10-6-11-7/h5-6,8H,4H2,1-3H3,(H-,10,11,13,14)/p+1/t8-/m0/s1
InChIKeyGPPYTCRVKHULJH-QMMMGPOBSA-O
SMILES
SoftwareSMILES
CACTVS 3.385C[N+](C)(C)[CH](Cc1[nH]cnc1)C(O)=O
ACDLabs 12.01O=C(O)C(Cc1cncn1)[N+](C)(C)C
CACTVS 3.385C[N+](C)(C)[C@@H](Cc1[nH]cnc1)C(O)=O
OpenEye OEToolkits 1.7.6C[N+](C)(C)C(Cc1cnc[nH]1)C(=O)O
OpenEye OEToolkits 1.7.6C[N+](C)(C)[C@@H](Cc1cnc[nH]1)C(=O)O
FormulaC9 H16 N3 O2
NameN,N,N-trimethyl-histidine;
Hercynine
ChEMBL
DrugBank
ZINC
PDB chain6kvw Chain B Residue 506 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6kvw The complex structure of EanB/C339A/C370A and hercynine
Resolution2.25 Å
Binding residue
(original residue number in PDB)
Y188 W216 Y353 Y355 A374 Y375 C412 W416
Binding residue
(residue number reindexed from 1)
Y163 W191 Y328 Y330 A349 Y350 C387 W391
Annotation score1
Enzymatic activity
Catalytic site (original residue number in PDB) E345 C412 G413 T414 G415 W416 R417 G439
Catalytic site (residue number reindexed from 1) E320 C387 G388 T389 G390 W391 R392 G414
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0004792 thiosulfate sulfurtransferase activity
GO:0016740 transferase activity
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:6kvw, PDBe:6kvw, PDBj:6kvw
PDBsum6kvw
PubMed
UniProtB3ECE3

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