Structure of PDB 6kdv Chain B Binding Site BS03
Receptor Information
>6kdv Chain B (length=283) Species:
300852
(Thermus thermophilus HB8) [
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SYLYVEHAVVEREAGGIGIYDQEGLTLAPVAGLGVLFLGPGTRITHAAVR
LLAENGCTVAWVGEGMARFYAQGLGDTRSAARFYRQARAWADPALHLEVV
MRLYRMRFSEPLPEGLTLEQVRGLEGVRVRNAYARWSRETGVPWYGRSYD
RGNWRAADPVNRALSAGASYLYGLAHAAIVSLGFSPALGFIHTGKLLSFV
YDIADLYKADYLVPAAFRTVAESEEAVERRVRRALREAIQEGRLLERMAE
DLLNLFRGLGLPTRPGGLWDLEGEVEGGVAYGG
Ligand information
>6kdv Chain H (length=13) [
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tttttccagcatc
Receptor-Ligand Complex Structure
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PDB
6kdv
Crystal structure of Cas1 in complex with branched DNA.
Resolution
3.11 Å
Binding residue
(original residue number in PDB)
E31 R32 G35 R63 T65
Binding residue
(residue number reindexed from 1)
E11 R12 G15 R43 T45
Enzymatic activity
Enzyme Commision number
3.1.-.-
Gene Ontology
Molecular Function
GO:0003676
nucleic acid binding
GO:0003677
DNA binding
GO:0004519
endonuclease activity
GO:0004520
DNA endonuclease activity
GO:0046872
metal ion binding
Biological Process
GO:0043571
maintenance of CRISPR repeat elements
GO:0051607
defense response to virus
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Molecular Function
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Biological Process
External links
PDB
RCSB:6kdv
,
PDBe:6kdv
,
PDBj:6kdv
PDBsum
6kdv
PubMed
31792780
UniProt
Q53WG8
|CAS1B_THET8 CRISPR-associated endonuclease Cas1 2 (Gene Name=cas1-2)
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