Structure of PDB 6cja Chain B Binding Site BS03
Receptor Information
>6cja Chain B (length=381) Species:
272624
(Legionella pneumophila subsp. pneumophila str. Philadelphia 1) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
KTHFDTRAIHAGQEPCKSTGAVMTPIYATSTYKQIAPGEHLGYEYSRTQN
PTRKAYEDCIASLESGQKGFAFASGMAAINTVIDLLGSGDHVVAMDDLYG
GTFRLFDKVKTRTSNLSFSFIDMSVPENIEAAITPKTKLLWLETPSNPML
KLANLRKIAAIAKKYNLITVADNTFATPWIQRPLELGFDIVLHSATKYLN
GHSDVVSGVVVVGDNSVLSDKIAFLQNSCGAVAGPFDSFLVLRSLKTLSV
RMQRHCENANHLANWLSSHPKIEKVIYPGLKSHPQYSLAKEQMNNFGGMI
SLVLKGSLEDAKRFLARCELFTLAESLGGVESLIEHPAIMTHASIPVEQR
KALGIEDGFIRLSVGIEHIDDLRADLEHALG
Ligand information
Ligand ID
SER
InChI
InChI=1S/C3H7NO3/c4-2(1-5)3(6)7/h2,5H,1,4H2,(H,6,7)/t2-/m0/s1
InChIKey
MTCFGRXMJLQNBG-REOHCLBHSA-N
SMILES
Software
SMILES
CACTVS 3.341
N[CH](CO)C(O)=O
OpenEye OEToolkits 1.5.0
C(C(C(=O)O)N)O
CACTVS 3.341
N[C@@H](CO)C(O)=O
ACDLabs 10.04
O=C(O)C(N)CO
OpenEye OEToolkits 1.5.0
C([C@@H](C(=O)O)N)O
Formula
C3 H7 N O3
Name
SERINE
ChEMBL
CHEMBL11298
DrugBank
DB00133
ZINC
ZINC000000895034
PDB chain
6cja Chain A Residue 404 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
6cja
Crystal structure of Cystathionine beta-lyase from Legionella pneumophila Philadelphia 1 in complex with Alanyl-PLP and Serine
Resolution
1.7 Å
Binding residue
(original residue number in PDB)
Y101 R106 E327
Binding residue
(residue number reindexed from 1)
Y99 R104 E325
Annotation score
2
Enzymatic activity
Enzyme Commision number
4.4.1.8
: Transferred entry: 4.4.1.13.
Gene Ontology
Molecular Function
GO:0003962
cystathionine gamma-synthase activity
GO:0016829
lyase activity
GO:0016846
carbon-sulfur lyase activity
GO:0030170
pyridoxal phosphate binding
Biological Process
GO:0019346
transsulfuration
Cellular Component
GO:0005737
cytoplasm
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:6cja
,
PDBe:6cja
,
PDBj:6cja
PDBsum
6cja
PubMed
UniProt
Q5ZX43
[
Back to BioLiP
]