Structure of PDB 6b3p Chain B Binding Site BS03
Receptor Information
>6b3p Chain B (length=209) Species:
657317
(Agathobacter rectalis M104/1) [
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MDLTINYKSTLGDDVAAYIYKETNKPAGEWPGKTMTATAGHEGWYTMHLT
LDNSTDYSLILNDDGHGNQLKDVTLSTKGKAEAEYWFDGSLSETKPADWK
YVTTIHYLASGMGSTIYNYMWGADASATGAGVGKEWPGGQISANADHLGW
YDVVYTQDVKQNFSCIFNNNNGTQTDNIDVSVTSTSTELWVTGTKGDTTV
YKTAPDSWE
Ligand information
Ligand ID
GLC
InChI
InChI=1S/C6H12O6/c7-1-2-3(8)4(9)5(10)6(11)12-2/h2-11H,1H2/t2-,3-,4+,5-,6+/m1/s1
InChIKey
WQZGKKKJIJFFOK-DVKNGEFBSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
C(C1C(C(C(C(O1)O)O)O)O)O
OpenEye OEToolkits 1.5.0
C([C@@H]1[C@H]([C@@H]([C@H]([C@H](O1)O)O)O)O)O
CACTVS 3.341
OC[CH]1O[CH](O)[CH](O)[CH](O)[CH]1O
CACTVS 3.341
OC[C@H]1O[C@H](O)[C@H](O)[C@@H](O)[C@@H]1O
ACDLabs 10.04
OC1C(O)C(OC(O)C1O)CO
Formula
C6 H12 O6
Name
alpha-D-glucopyranose;
alpha-D-glucose;
D-glucose;
glucose
ChEMBL
CHEMBL423707
DrugBank
ZINC
ZINC000003861213
PDB chain
6b3p Chain F Residue 2 [
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Receptor-Ligand Complex Structure
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PDB
6b3p
Novel carbohydrate binding modules in the surface anchored alpha-amylase of Eubacterium rectale provide a molecular rationale for the range of starches used by this organism in the human gut.
Resolution
2.01 Å
Binding residue
(original residue number in PDB)
W208 Q247
Binding residue
(residue number reindexed from 1)
W30 Q69
Annotation score
4
External links
PDB
RCSB:6b3p
,
PDBe:6b3p
,
PDBj:6b3p
PDBsum
6b3p
PubMed
29139580
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