Structure of PDB 5z8n Chain B Binding Site BS03

Receptor Information
>5z8n Chain B (length=182) Species: 3702 (Arabidopsis thaliana) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
RKELDSYTIKGTNKVVRAGDCVLMRPSDAGKPPYVARVEKIEADARNNVK
VHCRWYYRPEESLGGRRQFHGAKELFLSDHFDVQSAHTIEGKCIVHTFKN
YTRLENVGAEDYYCRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCE
GCKDWYHPACVGMTIEEAKKLDHFVCAECSSD
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain5z8n Chain B Residue 302 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB5z8n EBS is a bivalent histone reader that regulates floral phase transition in Arabidopsis.
Resolution3.1 Å
Binding residue
(original residue number in PDB)
C164 C167 C191 C194
Binding residue
(residue number reindexed from 1)
C149 C152 C176 C179
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003682 chromatin binding

View graph for
Molecular Function
External links
PDB RCSB:5z8n, PDBe:5z8n, PDBj:5z8n
PDBsum5z8n
PubMed30082787
UniProtF4JL28|EBS_ARATH Chromatin remodeling protein EBS (Gene Name=EBS)

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