Structure of PDB 5yse Chain B Binding Site BS03

Receptor Information
>5yse Chain B (length=387) Species: 272626 (Listeria innocua Clip11262) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
VLNVWAMGDEAKSLKELAQKFTKDTGIEVKVQVIPWANAHDKLLTAVASK
SGPDVVQMGTTWMPEFVEAGALLDITKDVEKSKNMNSDLFFPGSVKTTQF
DGKTYGVPWYAETRVLFYRTDLLKKVGYNEAPKTWDELSDAALKLSKRGK
DMYGFAIDPNEQTTGFIFGRQNGSPLFDKDGTPVFNKKPFVDTVTYLDSF
IKNGSAPDTDLGLDASQSFGGDGIVPMFMSGPWMVNTLKDTAPDIDGKWA
TAVLPKKENNESSLGGANLSIFKYSNKKDDALKFMDYMSQPDVQLSWLKD
TNSMPARMDAWEDDMLKNDPYYKVFGEQMKTAEPMPLIPQFEEIAQLYGK
SWEQIYRGGADVQTQMDTFNDQVEALLKKLEHHHHHH
Ligand information
Ligand IDBGC
InChIInChI=1S/C6H12O6/c7-1-2-3(8)4(9)5(10)6(11)12-2/h2-11H,1H2/t2-,3-,4+,5-,6-/m1/s1
InChIKeyWQZGKKKJIJFFOK-VFUOTHLCSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.7.6C(C1C(C(C(C(O1)O)O)O)O)O
CACTVS 3.370OC[C@H]1O[C@@H](O)[C@H](O)[C@@H](O)[C@@H]1O
CACTVS 3.370OC[CH]1O[CH](O)[CH](O)[CH](O)[CH]1O
OpenEye OEToolkits 1.7.6C([C@@H]1[C@H]([C@@H]([C@H]([C@@H](O1)O)O)O)O)O
ACDLabs 12.01OC1C(O)C(OC(O)C1O)CO
FormulaC6 H12 O6
Namebeta-D-glucopyranose;
beta-D-glucose;
D-glucose;
glucose
ChEMBLCHEMBL1614854
DrugBankDB02379
ZINCZINC000003833800
PDB chain5yse Chain D Residue 4 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB5yse Structural and thermodynamic insights into beta-1,2-glucooligosaccharide capture by a solute-binding protein inListeria innocua.
Resolution1.6 Å
Binding residue
(original residue number in PDB)		W71 G94 T95 T96 W97 E147 G301
Binding residue
(residue number reindexed from 1)		W36 G59 T60 T61 W62 E112 G266
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0046872 metal ion binding
GO:1901982 maltose binding
Biological Process
GO:0015768 maltose transport
GO:0042956 maltodextrin transmembrane transport
Cellular Component
GO:0055052 ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:5yse, PDBe:5yse, PDBj:5yse
PDBsum5yse
PubMed29678880
UniProtQ92AS8

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