Structure of PDB 5oyh Chain B Binding Site BS03

Receptor Information
>5oyh Chain B (length=184) Species: 765915 (Catenaria anguillulae PL171) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
TEAKEYESVTVFFSDITNFTVISSRTSTKDMMATLNKLWLEYDAIAKRWG
VYKVKTIGDAYLGVTGAPEVVPDHADRAVNFALDIIEMIKTFKTATGESI
NIRIGLNSGPVTAGVLGDLNPHWDLVGDTVNTASRMESTSKAGHIHISDS
TYQMIKGKFVTQPLDLMEVKGKGKMQTYWVTARK
Ligand information
Ligand IDCA
InChIInChI=1S/Ca/q+2
InChIKeyBHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Ca+2]
FormulaCa
NameCALCIUM ION
ChEMBL
DrugBankDB14577
ZINC
PDB chain5oyh Chain B Residue 702 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB5oyh Rhodopsin-cyclases for photocontrol of cGMP/cAMP and 2.3 angstrom structure of the adenylyl cyclase domain.
Resolution2.249 Å
Binding residue
(original residue number in PDB)		D457 I458 D501
Binding residue
(residue number reindexed from 1)		D15 I16 D59
Annotation score4
Enzymatic activity
Catalytic site (original residue number in PDB) D457 I458 D501 R577 K612
Catalytic site (residue number reindexed from 1) D15 I16 D59 R135 K170
Enzyme Commision number ?
Gene Ontology
Biological Process
GO:0009190 cyclic nucleotide biosynthetic process
GO:0035556 intracellular signal transduction

View graph for
Biological Process
External links
PDB RCSB:5oyh, PDBe:5oyh, PDBj:5oyh
PDBsum5oyh
PubMed29799525
UniProtA0A1Y2HEJ3

[Back to BioLiP]