Structure of PDB 5llx Chain B Binding Site BS03

Receptor Information
>5llx Chain B (length=654) Species: 1036674 (Idiomarina sp. A28L) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
DDISKLIAACDQEPIHIPNAIQPFGAMLIVEKDTQQIVYASANSAEYFSV
ADNTIHELSDIKQANINSLLPEHLISGLASAIRENEPIWVETDRLSFLGW
RHENYYIIEVERYHVQTSNWFEIQFQRAFQKLRNCKTHNDLINTLTRLIQ
EISGYDRVMIYQFDPEWNGRVIAESVRQLFTSMLNHHFPASDIPAQARAM
YSINPIRIIPDVNAEPQPLHMIHKPQNTEAVNLSSGVLRAVSPLHMQYLR
NFGVSASTSIGIFNEDELWGIVACHHTKPRAIGRRIRRLLVRTVEFAAER
LWLIHSRNVERYMVTVQAAREQLSHSSHEIVIEHAADWCKLFRCDGIGYL
RGEELTTYGETPDQTTINKLVEWLSLFWHSHMLKEDAPGLLPDGSRFAGL
LAIPYLLLFRVAQNEVRTWAGKPEKLSVETSTGTMLGPRKSFEAWQDEVS
GKSQPWRTAQLYAARDIARDLLIVADSMQLNLLNDQLADANENLEKLASF
DDLTGIFNRRRMEDRLESEVKEAQRYKKQFGILLFDLDKFKSVNDTYGHN
IGDQILQNTCAAVSETLRDTDKFGRWGGEEFLIIAPQTGMPELMQLGERV
RAAVEKMQHKDLPAVTISIGVAEFQNDTRWDHMIDRADKAMYRAKENGRN
QVCS
Ligand information
Ligand IDMG
InChIInChI=1S/Mg/q+2
InChIKeyJLVVSXFLKOJNIY-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Mg+2]
CACTVS 3.341[Mg++]
FormulaMg
NameMAGNESIUM ION
ChEMBL
DrugBankDB01378
ZINC
PDB chain5llx Chain B Residue 704 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB5llx Long-range allosteric signaling in red light-regulated diguanylyl cyclases.
Resolution2.8 Å
Binding residue
(original residue number in PDB)		D564 L565 E607
Binding residue
(residue number reindexed from 1)		D536 L537 E579
Annotation score1
Enzymatic activity
Enzyme Commision number 2.7.7.65: diguanylate cyclase.
Gene Ontology
Molecular Function
GO:0005525 GTP binding
GO:0009881 photoreceptor activity
GO:0046872 metal ion binding
GO:0052621 diguanylate cyclase activity
Biological Process
GO:0006355 regulation of DNA-templated transcription
GO:0009584 detection of visible light
GO:0043709 cell adhesion involved in single-species biofilm formation
GO:1902201 negative regulation of bacterial-type flagellum-dependent cell motility
Cellular Component
GO:0005886 plasma membrane

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:5llx, PDBe:5llx, PDBj:5llx
PDBsum5llx
PubMed28275738
UniProtF7RW09

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