Structure of PDB 5jmp Chain B Binding Site BS03
Receptor Information
>5jmp Chain B (length=410) Species:
36329
(Plasmodium falciparum 3D7) [
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PINVAIFGSTGSIGTNALNIIRECNKIENVFNVKALYVNKSVNELYEQAR
EFLPEYLCIHDKSVYEELKELVKNIKDYKPIILCGDEGMKEICSSNSIDK
IVIGIDSFQGLYSTMYAIMNNKIVALANKESIVSAGFFLKKLLNIHKNAK
IIPVDSEHSAIFQCLDNNKVLKTKCLQDNFSKINNINKIFLCSSGGPFQN
LTMDELKNVTSENALKHPKWKMGKKITIDSATMMNKGLEVIETHFLFDVD
YNDIEVIVHKECIIHSCVEFIDKSVISQMYYPDMQIPILYSLTWPDRIKT
NLKPLDLAQVSTLTFHKPSLEHFPCIKLAYQAGIKGNFYPTVLNASNEIA
NNLFLNNKIKYFDISSIISQVLESFNSQKVSENSEDLMKQILQIHSWAKD
KATDIYNKHN
Ligand information
Ligand ID
6LB
InChI
InChI=1S/C6H13NO/c1-2-7-3-5-8-6-4-7/h2-6H2,1H3
InChIKey
HVCNXQOWACZAFN-UHFFFAOYSA-N
SMILES
Software
SMILES
ACDLabs 12.01
CACTVS 3.385
OpenEye OEToolkits 2.0.4
CCN1CCOCC1
Formula
C6 H13 N O
Name
4-ethylmorpholine
ChEMBL
CHEMBL3561880
DrugBank
ZINC
ZINC000020230620
PDB chain
5jmp Chain B Residue 505 [
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Receptor-Ligand Complex Structure
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PDB
5jmp
Targeting an Aromatic Hotspot in Plasmodium falciparum 1-Deoxy-d-xylulose-5-phosphate Reductoisomerase with beta-Arylpropyl Analogues of Fosmidomycin.
Resolution
1.7 Å
Binding residue
(original residue number in PDB)
Q407 L448
Binding residue
(residue number reindexed from 1)
Q331 L372
Annotation score
1
Enzymatic activity
Enzyme Commision number
1.1.1.267
: 1-deoxy-D-xylulose-5-phosphate reductoisomerase.
Gene Ontology
Molecular Function
GO:0030604
1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
GO:0046872
metal ion binding
GO:0070402
NADPH binding
Biological Process
GO:0008299
isoprenoid biosynthetic process
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Molecular Function
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Biological Process
External links
PDB
RCSB:5jmp
,
PDBe:5jmp
,
PDBj:5jmp
PDBsum
5jmp
PubMed
27487410
UniProt
Q8IKG4
|DXR_PLAF7 1-deoxy-D-xylulose 5-phosphate reductoisomerase, apicoplastic (Gene Name=DXR)
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