Structure of PDB 5iuc Chain B Binding Site BS03

Receptor Information
>5iuc Chain B (length=123) Species: 1302 (Streptococcus gordonii) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
DTERPVVNVPSEITVYRGESFEYFATVTDNSNAFDLAKTVVRWLYSNQPG
RGTEWLQYSVTQVGNQLKVRIFGNVPIDTTIGDYTRYVVATDAAGNVNAT
QTEMGNAAVDKTSVNGQFKLIIR
Ligand information
Ligand IDMG
InChIInChI=1S/Mg/q+2
InChIKeyJLVVSXFLKOJNIY-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Mg+2]
CACTVS 3.341[Mg++]
FormulaMg
NameMAGNESIUM ION
ChEMBL
DrugBankDB01378
ZINC
PDB chain5iuc Chain B Residue 601 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB5iuc A structural model for binding of the serine-rich repeat adhesin GspB to host carbohydrate receptors.
Resolution1.253 Å
Binding residue
(original residue number in PDB)
D399 E401 D427 N428 D490
Binding residue
(residue number reindexed from 1)
D1 E3 D29 N30 D92
Annotation score4
Enzymatic activity
Enzyme Commision number ?
External links
PDB RCSB:5iuc, PDBe:5iuc, PDBj:5iuc
PDBsum5iuc
PubMed21765814
UniProtQ939N5|GSPB_STRGN Platelet binding protein GspB (Gene Name=gspB)

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