Structure of PDB 5ik8 Chain B Binding Site BS03
Receptor Information
>5ik8 Chain B (length=378) Species:
10090
(Mus musculus) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
AMVHGPCVAESEPALLTGSKQFGLSRNSHIAIAFDDTKVKNRLTIELEVR
TEAESGLLFYMARINHADFATVQLRNGFPYFSYDLGSGDTSTMIPTKIND
GQWHKIKIVRVKQEGILYVDDASSQTISPKKADILDVVGILYVGGLPINY
TTRRIGPVTYSLDGCVRNLHMEQAPVDLDQPTSSFHVGTCFANAESGTYF
DGTGFAKAVGGFKVGLDLLVEFEFRTTRPTGVLLGVSSQKMDGMGIEMID
EKLMFHVDNGAGRFTAIYDAEIPGHMCNGQWHKVTAKKIKNRLELVVDGN
QVDAQSPNSASTSADTNDPVFVGGFPGGLNQFGLTTNIRFRGCIRSLKLT
KGTGKPLEVNFAKALELRGVQPVSCPTT
Ligand information
Ligand ID
CA
InChI
InChI=1S/Ca/q+2
InChIKey
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
Software
SMILES
CACTVS 3.341
[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Ca+2]
Formula
Ca
Name
CALCIUM ION
ChEMBL
DrugBank
DB14577
ZINC
PDB chain
5ik8 Chain B Residue 4001 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
5ik8
Structural basis of laminin binding to the LARGE glycans on dystroglycan.
Resolution
2.0 Å
Binding residue
(original residue number in PDB)
D2808 L2825 I2874 D2876
Binding residue
(residue number reindexed from 1)
D68 L85 I134 D136
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
External links
PDB
RCSB:5ik8
,
PDBe:5ik8
,
PDBj:5ik8
PDBsum
5ik8
PubMed
27526028
UniProt
Q60675
|LAMA2_MOUSE Laminin subunit alpha-2 (Gene Name=Lama2)
[
Back to BioLiP
]