Structure of PDB 4v1u Chain B Binding Site BS03

Receptor Information
>4v1u Chain B (length=743) Species: 118322 (Lyngbya aestuarii) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
LLQIQPHFHVEVIEPKQVYLLGEQANHALTGQLYCQILPLLNGQYTLEQI
VEKLDGEVPPEYIDYVLERLAEKGYLTEAAPELSSEVAAFWSELGIAPPV
AAEALRQPVTLTPVGNISEVTVAALTTALRDIGISVQTTALNVVLTDDYL
QPELAKINKQALESQQTWLLVKPVGSVLWLGPVFVPGKTGCWDCLAHRLR
GNREVEASVLRQKQAQGCLPTARATLPSTLQTGLQFAATEIAKWIVKYHV
NATAPGTVFFPTLDGKIITLNHSILDLKSHILIKRSQCPTCGDPKILQHR
GFEPLKLESRPKQGHRGTTPEQTVQKYQHLISPVTGVVTELVRITDPANP
LVHTYRAGHGSATSLRGLRNTLKHKSSGKGKTDSQSKASGLCEAVERYSG
IFQGDEPRKRATLAELGDLAIHPEQCLCFSDGQYANRETLNEQATVAHDW
IPQRFDASQAIEWTPVWSLTEQTHKYLPTALCYYHYPLPPEHRFARGDSN
GNAAGNTLEEAILQGFMELVERDGVALWWYNRLRRPAVDLGSFNEPYFVQ
LQQFYRENDRDLWVLDLTADLGIPAFAGVSNRKTSERLILGFGAHLDPTI
AILRAVTEVNQIGLELDKVPDENLKSDATDWLITEKLADHPYLLPDTTQP
LKTAQDYPKRWSDDIYTDVMTCVNIAQQAGLETLVIDQTRPDIGLNVVKV
TVPGMRHFWSRFGEGRLYDVPVKLGWLDEPLTEAQMNPTPMPF
Ligand information
Ligand IDAMP
InChIInChI=1S/C10H14N5O7P/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(22-10)1-21-23(18,19)20/h2-4,6-7,10,16-17H,1H2,(H2,11,12,13)(H2,18,19,20)/t4-,6-,7-,10-/m1/s1
InChIKeyUDMBCSSLTHHNCD-KQYNXXCUSA-N
SMILES
SoftwareSMILES
CACTVS 3.370Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(O)=O)[CH](O)[CH]3O
CACTVS 3.370Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P](O)(O)=O)[C@@H](O)[C@H]3O
OpenEye OEToolkits 1.7.6c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)COP(=O)(O)O)O)O)N
ACDLabs 12.01O=P(O)(O)OCC3OC(n2cnc1c(ncnc12)N)C(O)C3O
OpenEye OEToolkits 1.7.6c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)O)O)O)N
FormulaC10 H14 N5 O7 P
NameADENOSINE MONOPHOSPHATE
ChEMBLCHEMBL752
DrugBankDB00131
ZINCZINC000003860156
PDB chain4v1u Chain B Residue 777 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB4v1u Structural Analysis of Leader Peptide Binding Enables Leader-Free Cyanobactin Processing.
Resolution2.86 Å
Binding residue
(original residue number in PDB)
R344 K409 S419 C422 E423 E426 A533 A534 N536 R636
Binding residue
(residue number reindexed from 1)
R316 K379 S389 C392 E393 E396 A503 A504 N506 R604
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:4v1u, PDBe:4v1u, PDBj:4v1u
PDBsum4v1u
PubMed26098679
UniProtA0YXD2

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