Structure of PDB 4r9g Chain B Binding Site BS03
Receptor Information
>4r9g Chain B (length=394) Species:
44256
(Caldanaerobius polysaccharolyticus) [
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QVVLTLWYPWAGPDGDAVVSLAKEYSKTHPNVQIKAQMVSGAGIAAKFLS
AVAAGNPPDLVLYWGQDALPGLADQGAIIPLDDYLKDVDTSKFFEAAYNA
MKYKGKIYGLPEMVNVRVLFWNKDLFKQAGLDPNTPPKTIAELDQMAAKL
TKTKNGTIEQMGFIPWIGQGVPHVMAGVFGTSLVDSNGNPILSPDKNPQL
LNLLKWEVSYSDKYGAMNINKFIAGMSQNSSQANDPFVLGKVAMMISGEW
QINANKQYNPKLNFGVGPIPQAPGGKPMPSLMDGNTWMIPKGSKHPQEAM
DFIKWTMDPQRIADTADKVYNIAPIVEAAKIQKLNNDPYFKEVLNVAQKG
SIYYTPAAKGMLSTETAANNAFQAAQYKKSTPEQALKNAQAEAE
Ligand information
Ligand ID
BMA
InChI
InChI=1S/C6H12O6/c7-1-2-3(8)4(9)5(10)6(11)12-2/h2-11H,1H2/t2-,3-,4+,5+,6-/m1/s1
InChIKey
WQZGKKKJIJFFOK-RWOPYEJCSA-N
SMILES
Software
SMILES
CACTVS 3.341
OC[C@H]1O[C@@H](O)[C@@H](O)[C@@H](O)[C@@H]1O
OpenEye OEToolkits 1.5.0
C(C1C(C(C(C(O1)O)O)O)O)O
CACTVS 3.341
OC[CH]1O[CH](O)[CH](O)[CH](O)[CH]1O
OpenEye OEToolkits 1.5.0
C([C@@H]1[C@H]([C@@H]([C@@H]([C@@H](O1)O)O)O)O)O
ACDLabs 10.04
OC1C(O)C(OC(O)C1O)CO
Formula
C6 H12 O6
Name
beta-D-mannopyranose;
beta-D-mannose;
D-mannose;
mannose
ChEMBL
DrugBank
ZINC
ZINC000003830679
PDB chain
4r9g Chain D Residue 3 [
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Receptor-Ligand Complex Structure
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PDB
4r9g
Structural and Biochemical Basis for Mannan Utilization by Caldanaerobius polysaccharolyticus Strain ATCC BAA-17.
Resolution
2.2 Å
Binding residue
(original residue number in PDB)
W25 D29 N137 W272 N307 N343
Binding residue
(residue number reindexed from 1)
W10 D14 N115 W250 N285 N321
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
External links
PDB
RCSB:4r9g
,
PDBe:4r9g
,
PDBj:4r9g
PDBsum
4r9g
PubMed
25342756
UniProt
L0E2M2
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