Structure of PDB 4i4b Chain B Binding Site BS03
Receptor Information
>4i4b Chain B (length=376) Species:
32044
(Pseudomonas sp. 'mevalonii') [
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LDSRLPAFRNLSPAARLDHIGQLLGLSHDDVSLLANAGALPMDIANGMIE
NVIGTFELPYAVASNFQINGRDVLVPLVVEEPSIVAAASYMAKLARANGG
FTTSSSAPLMHAQVQIVGIQDPLNARLSLLRRKDEIIELANRKDQLLNSL
GGGCRDIEVHTFADTPRGPMLVAHLIVDVRDAMGANTVNTMAEAVAPLME
AITGGQVRLRILSNLADLRLARAQVRITPQQLETAEFSGEAVIEGILDAY
AFAAVDPYRAATHNKGIMNGIDPLIVATGNDWRAVEAGAHAYACRSGHYG
SLTTWEKDNNGHLVGTLEMPMPVGLVGGATKTHPLAQLSLRILGVKTAQA
LAEIAVAVGLAQNLGAMRALATEGIQ
Ligand information
Ligand ID
1CO
InChI
InChI=1S/C6H12O3S/c1-6(9,2-3-10)4-5(7)8/h9-10H,2-4H2,1H3,(H,7,8)/t6-/m1/s1
InChIKey
MCHPXVGJHBKMNR-ZCFIWIBFSA-N
SMILES
Software
SMILES
CACTVS 3.370
C[C](O)(CCS)CC(O)=O
ACDLabs 12.01
O=C(O)CC(O)(C)CCS
OpenEye OEToolkits 1.7.6
C[C@@](CCS)(CC(=O)O)O
CACTVS 3.370
C[C@@](O)(CCS)CC(O)=O
OpenEye OEToolkits 1.7.6
CC(CCS)(CC(=O)O)O
Formula
C6 H12 O3 S
Name
(3S)-3-hydroxy-3-methyl-5-sulfanylpentanoic acid
ChEMBL
DrugBank
ZINC
PDB chain
4i4b Chain B Residue 1002 [
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Receptor-Ligand Complex Structure
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PDB
4i4b
A Novel Role for Coenzyme A during Hydride Transfer in 3-Hydroxy-3-methylglutaryl-coenzyme A Reductase.
Resolution
1.7 Å
Binding residue
(original residue number in PDB)
E583 R761 T764 K767 N771
Binding residue
(residue number reindexed from 1)
E81 R259 T262 K265 N269
Annotation score
3
Enzymatic activity
Enzyme Commision number
1.1.1.88
: hydroxymethylglutaryl-CoA reductase.
Gene Ontology
Molecular Function
GO:0004420
hydroxymethylglutaryl-CoA reductase (NADPH) activity
GO:0016491
oxidoreductase activity
GO:0016616
oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0140643
hydroxymethylglutaryl-CoA reductase (NADH) activity
Biological Process
GO:0015936
coenzyme A metabolic process
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Molecular Function
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Biological Process
External links
PDB
RCSB:4i4b
,
PDBe:4i4b
,
PDBj:4i4b
PDBsum
4i4b
PubMed
23802607
UniProt
P13702
|MVAA_PSEMV 3-hydroxy-3-methylglutaryl-coenzyme A reductase (Gene Name=mvaA)
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