Structure of PDB 3sy9 Chain B Binding Site BS03

Receptor Information

>3sy9 Chain B (length=372) Species: 287 (Pseudomonas aeruginosa) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

EGFIEGSSLQLLTRNYYFNHDRRSKEWAQGFIATFQSGYTPGVVGFGVDA
YGMLGLKLGYESGKAPDEFSSGGAALKIRAFDTELKLGDQFLSNPVVAGG
ESRMLPQTFRGVSLTNNSFEDLTLTAGQVSFTKYYNDSHHLSWLGGTWGG
IEGFTSSLYAAELQNVWKQYYADVDYTYEIDDNWSLNPGAHYYKTVDSGD
SLLGRIDNNTYSLHFAVGYRQHTVTAVLQKVNGNTPFDYINQGDSIFLDN
SQQYSDFNGPNEKSWKLQYDYDFVALGVPGLSASASYSRGKLDLTRVDPD
SPGYGGWYSADGKNAKHWERDLDLQYVVQGGPAKDLSLRLRWATHRGTGG
YSAVDNDIDEYRVIVDYPIDVF

Ligand information

Ligand ID

C8E

InChI

InChI=1S/C16H34O5/c1-2-3-4-5-6-7-9-18-11-13-20-15-16-21-14-12-19-10-8-17/h17H,2-16H2,1H3

InChIKey

FEOZZFHAVXYAMB-UHFFFAOYSA-N

SMILES

Software	SMILES
ACDLabs 10.04	O(CCCCCCCC)CCOCCOCCOCCO
CACTVS 3.341 OpenEye OEToolkits 1.5.0	CCCCCCCCOCCOCCOCCOCCO

Formula

C16 H34 O5

Name

(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE

PDB chain

3sy9 Chain B Residue 505 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

Receptor-Ligand Complex Structure

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Structure summary

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PDB	3sy9 Substrate Specificity within a Family of Outer Membrane Carboxylate Channels.
Resolution	2.8 Å
Binding residue (original residue number in PDB)	L194 W198 L208
Binding residue (residue number reindexed from 1)	L144 W148 L158
Annotation score	1

Enzymatic activity

Enzyme Commision number

Gene Ontology

	Molecular Function
GO:0015288	porin activity

	Biological Process
GO:0055085	transmembrane transport

	Cellular Component
GO:0016020	membrane

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Molecular Function

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Cellular Component

External links

PDB	RCSB:3sy9, PDBe:3sy9, PDBj:3sy9
PDBsum	3sy9
PubMed	22272184
UniProt	Q9I6X0

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