Structure of PDB 3s5w Chain B Binding Site BS03

Receptor Information
>3s5w Chain B (length=414) Species: 287 (Pseudomonas aeruginosa) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHGNTLV
SQSELQISFLKDLVSLRNPTSPYSFVNYLHKHDRLVDFINLGTFYPCRME
FNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELV
RTTRALVVSPGGTPRIPQVFRALKGDGRVFHHSQYLEHMAKPMKIAIIGG
GQSAAEAFIDLNDSYPSVQADMILRASALKPADDSPFVNEVFAPKFTDLI
YSREHAERERLLREYHNTNYSVVDTDLIERIYGVFYRQKVSGIPRHAFRC
MTTVERATATAQGIELALRDAGSGELSVETYDAVILATGYERQLHRQLLE
PLAEYLGDHEIGRDYRLQTDERCKVAIYAQGFSQASHGLSDTLLSVLPVR
AEEISGSLYQHLKP
Ligand information
Ligand IDONH
InChIInChI=1S/C5H12N2O3/c6-4(5(8)9)2-1-3-7-10/h4,7,10H,1-3,6H2,(H,8,9)/t4-/m0/s1
InChIKeyOZMJDTPATROLQC-BYPYZUCNSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.7.2C(CC(C(=O)O)N)CNO
CACTVS 3.370N[CH](CCCNO)C(O)=O
CACTVS 3.370N[C@@H](CCCNO)C(O)=O
OpenEye OEToolkits 1.7.2C(C[C@@H](C(=O)O)N)CNO
ACDLabs 12.01O=C(O)C(N)CCCNO
FormulaC5 H12 N2 O3
NameN~5~-hydroxy-L-ornithine
ChEMBL
DrugBank
ZINCZINC000005113879
PDB chain3s5w Chain B Residue 447 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB3s5w Two Structures of an N-Hydroxylating Flavoprotein Monooxygenase: ORNITHINE HYDROXYLASE FROM PSEUDOMONAS AERUGINOSA.
Resolution1.9 Å
Binding residue
(original residue number in PDB)		Q64 I65 K69 N254 F257 N284 L408 S410
Binding residue
(residue number reindexed from 1)		Q56 I57 K61 N239 F242 N269 L393 S395
Annotation score5
Enzymatic activity
Enzyme Commision number 1.14.13.195: L-ornithine N(5)-monooxygenase (NADPH).
Gene Ontology
Molecular Function
GO:0004497 monooxygenase activity
GO:0031172 ornithine N5-monooxygenase activity
Biological Process
GO:0002049 pyoverdine biosynthetic process
GO:0006879 intracellular iron ion homeostasis
GO:0009058 biosynthetic process
Cellular Component
GO:0005737 cytoplasm
GO:0005886 plasma membrane

View graph for
Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:3s5w, PDBe:3s5w, PDBj:3s5w
PDBsum3s5w
PubMed21757711
UniProtQ51548|PVDA_PSEAE L-ornithine N(5)-monooxygenase (Gene Name=pvdA)

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