Structure of PDB 3or3 Chain B Binding Site BS03
Receptor Information
>3or3 Chain B (length=173) Species:
585532
(Helicobacter pylori 118) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
HEFMAKRKSDIILKSVDDLKDEIDYKDFEYKEYFNLLCELVPNNSLEKLE
INAIDEKNMKNEGLVYVFVIQGKIFKIGHSITPITKRVQSYNCGKVEYRK
NGTCSTTNYFVLQSLLKINKIVQVYAFFPEQPTYTLFGKTYQDSFSTSKR
AENVILENFIKNHNKKPIGCTQT
Ligand information
>3or3 Chain F (length=4) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
gatc
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
3or3
Hpy188I-DNA pre- and post-cleavage complexes--snapshots of the GIY-YIG nuclease mediated catalysis.
Resolution
1.95 Å
Binding residue
(original residue number in PDB)
Y63 K73 H76 S77 I78 K83 R84 Q86 S87 S102 K146 Q169 T170
Binding residue
(residue number reindexed from 1)
Y66 K76 H79 S80 I81 K86 R87 Q89 S90 S105 K149 Q172 T173
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0004519
endonuclease activity
View graph for
Molecular Function
External links
PDB
RCSB:3or3
,
PDBe:3or3
,
PDBj:3or3
PDBsum
3or3
PubMed
20935048
UniProt
Q9KJ88
[
Back to BioLiP
]