Structure of PDB 3or3 Chain B Binding Site BS03

Receptor Information
>3or3 Chain B (length=173) Species: 585532 (Helicobacter pylori 118) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
HEFMAKRKSDIILKSVDDLKDEIDYKDFEYKEYFNLLCELVPNNSLEKLE
INAIDEKNMKNEGLVYVFVIQGKIFKIGHSITPITKRVQSYNCGKVEYRK
NGTCSTTNYFVLQSLLKINKIVQVYAFFPEQPTYTLFGKTYQDSFSTSKR
AENVILENFIKNHNKKPIGCTQT
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB3or3 Hpy188I-DNA pre- and post-cleavage complexes--snapshots of the GIY-YIG nuclease mediated catalysis.
Resolution1.95 Å
Binding residue
(original residue number in PDB)
Y63 K73 H76 S77 I78 K83 R84 Q86 S87 S102 K146 Q169 T170
Binding residue
(residue number reindexed from 1)
Y66 K76 H79 S80 I81 K86 R87 Q89 S90 S105 K149 Q172 T173
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0004519 endonuclease activity

View graph for
Molecular Function
External links
PDB RCSB:3or3, PDBe:3or3, PDBj:3or3
PDBsum3or3
PubMed20935048
UniProtQ9KJ88

[Back to BioLiP]