Structure of PDB 3l7m Chain B Binding Site BS03
Receptor Information
>3l7m Chain B (length=411) Species:
176279
(Staphylococcus epidermidis RP62A) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
AFKVNQFRKTLRHVKNIVLRRKNKERSLYDLTDKEDNVKPKTIVFESFGG
KNYSDSPKYIYEYMQKYYPNYRYIWSFKNPDKNVVPGSAEKVKRNSAEYY
QAYSEASHWVSNARTPLYLNKKENQTYIQTWHGTPLKRLANDMKVVRMPG
TTTPKYKRNFNRETSRWDYLISPNRYSTEIFRSAFWMDEERILEIGYPRN
DVLVNRANDQEYLDEIRTHLNLPSDKKVIMYAPTWRDDEFVSKGKYLFEL
KIDLDNLYKELGDDYVILLRMAYLISNALDLSGYENFAIDVSNYNDVSEL
FLISDCLITDYSSVMFDYGILKRPQFFFAYDIDKYDKGLRGFYMNYMEDL
PGPIYTEPYGLAKELKNLDKVQQQYQEKIDAFYDRFCSVDNGKASQYIGD
LIHKDIKEQLE
Ligand information
Ligand ID
PO4
InChI
InChI=1S/H3O4P/c1-5(2,3)4/h(H3,1,2,3,4)/p-3
InChIKey
NBIIXXVUZAFLBC-UHFFFAOYSA-K
SMILES
Software
SMILES
CACTVS 3.341
[O-][P]([O-])([O-])=O
ACDLabs 10.04
[O-]P([O-])([O-])=O
OpenEye OEToolkits 1.5.0
[O-]P(=O)([O-])[O-]
Formula
O4 P
Name
PHOSPHATE ION
ChEMBL
DrugBank
DB14523
ZINC
PDB chain
3l7m Chain B Residue 731 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
3l7m
Structure of the bacterial teichoic acid polymerase TagF provides insights into membrane association and catalysis.
Resolution
2.85 Å
Binding residue
(original residue number in PDB)
K449 T546 S624 S625
Binding residue
(residue number reindexed from 1)
K137 T234 S312 S313
Annotation score
1
Enzymatic activity
Enzyme Commision number
2.7.8.12
: teichoic acid poly(glycerol phosphate) polymerase.
Gene Ontology
Molecular Function
GO:0016740
transferase activity
GO:0047355
CDP-glycerol glycerophosphotransferase activity
Biological Process
GO:0019350
teichoic acid biosynthetic process
GO:0071555
cell wall organization
Cellular Component
GO:0005886
plasma membrane
GO:0016020
membrane
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:3l7m
,
PDBe:3l7m
,
PDBj:3l7m
PDBsum
3l7m
PubMed
20400947
UniProt
Q5HLM5
|TAGF_STAEQ Teichoic acid poly(glycerol phosphate) polymerase (Gene Name=tagF)
[
Back to BioLiP
]