Structure of PDB 3h7j Chain B Binding Site BS03
Receptor Information
>3h7j Chain B (length=224) Species:
1423
(Bacillus subtilis) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
KTKEDMQELYFPTPKLIEWENGVRQYSTVRGDTEVLMSYVPPHTNVEPHQ
HKEVQIGMVVSGELMMTVGDVTRKMTALESAYIAPPHVPHGARNDTDQEV
IAIDIKRLKADETYTSPEDYFLDIFKTRDLLPGMEVTFFVEDWVEIMLAK
IPGNGGEMPFHKHRNEQIGICIGGGYDMTVEGCTVEMKFGTAYFCEPRED
HGAINRSEKESKSINIFFPPRYNR
Ligand information
Ligand ID
PPY
InChI
InChI=1S/C9H8O3/c10-8(9(11)12)6-7-4-2-1-3-5-7/h1-5H,6H2,(H,11,12)
InChIKey
BTNMPGBKDVTSJY-UHFFFAOYSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
c1ccc(cc1)CC(=O)C(=O)O
CACTVS 3.341
OC(=O)C(=O)Cc1ccccc1
ACDLabs 10.04
O=C(C(=O)O)Cc1ccccc1
Formula
C9 H8 O3
Name
3-PHENYLPYRUVIC ACID
ChEMBL
CHEMBL1162488
DrugBank
DB03884
ZINC
ZINC000000901485
PDB chain
3h7j Chain B Residue 246 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
3h7j
Role of Bacillus subtilis BacB in the synthesis of bacilysin
Resolution
1.87 Å
Binding residue
(original residue number in PDB)
M159 H162 H164 Q168 H202 A204 F218 Y223
Binding residue
(residue number reindexed from 1)
M158 H161 H163 Q167 H201 A203 F217 Y222
Annotation score
1
Enzymatic activity
Enzyme Commision number
5.3.3.19
: 3-[(4R)-4-hydroxycyclohexa-1,5-dien-1-yl]-2-oxopropanoate isomerase.
Gene Ontology
Molecular Function
GO:0005506
iron ion binding
GO:0016853
isomerase activity
GO:0016863
intramolecular oxidoreductase activity, transposing C=C bonds
GO:0046872
metal ion binding
GO:0050897
cobalt ion binding
Biological Process
GO:0017000
antibiotic biosynthetic process
Cellular Component
GO:0005737
cytoplasm
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:3h7j
,
PDBe:3h7j
,
PDBj:3h7j
PDBsum
3h7j
PubMed
19776011
UniProt
P39639
|BACB_BACSU H2HPP isomerase (Gene Name=bacB)
[
Back to BioLiP
]