Structure of PDB 3g4q Chain B Binding Site BS03

Receptor Information
>3g4q Chain B (length=145) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SVYDAAAQLTADVKKDLRDSWKVIGSDKKGNGVALMTTLFADNQETIGYF
KRLGDVSQGMANDKLRGHSITLMYALQNFIDQLDNPDDLVCVVEKFAVNH
ITRKISAAEFGKINGPIKKVLASKNFGDKYANAWAKLVAVVQAAL
Ligand information
Ligand IDMCH
InChIInChI=1S/CHCl3/c2-1(3)4/h1H
InChIKeyHEDRZPFGACZZDS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.5.0C(Cl)(Cl)Cl
ACDLabs 10.04
CACTVS 3.341
ClC(Cl)Cl
FormulaC H Cl3
Nametrichloromethane;
Chloroform CHCl3
ChEMBLCHEMBL44618
DrugBankDB11387
ZINCZINC000008214524
PDB chain3g4q Chain B Residue 150 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB3g4q Ligand migration and cavities within Scapharca Dimeric HbI: studies by time-resolved crystallo-graphy, Xe binding, and computational analysis.
Resolution1.6 Å
Binding residue
(original residue number in PDB)
I25 I118 V121 W135
Binding residue
(residue number reindexed from 1)
I24 I117 V120 W134
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0005344 oxygen carrier activity
GO:0019825 oxygen binding
GO:0020037 heme binding
GO:0042802 identical protein binding
GO:0046872 metal ion binding
Biological Process
GO:0001666 response to hypoxia
GO:0015671 oxygen transport
Cellular Component
GO:0005737 cytoplasm

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:3g4q, PDBe:3g4q, PDBj:3g4q
PDBsum3g4q
PubMed19913484
UniProtP02213|GLB1_ANAIN Globin-1

[Back to BioLiP]