Structure of PDB 2wb4 Chain B Binding Site BS03

Receptor Information
>2wb4 Chain B (length=441) Species: 190650 (Caulobacter vibrioides CB15) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SARILVVDDIEANVRLLEAKLTAEYYEVSTAMDGPTALAMAARDLPDIIL
LDVMMPGMDGFTVCRKLKDDPTTRHIPVVLITALDGRGDRIQGLESGASD
FLTKPIDDVMLFARVRSLTRFKLVIDELRQREASGLDGLGGRVLIVDDNE
RQAQRVAAELGVEHRPVIESDPEKAKISAGGPVDLVIVNAAAKNFDGLRF
TAALRSEERTRQLPVLAMVDPDDRGRMVKALEIGVNDILSRPIDPQELSA
RVKTQIQRKRYTDYLRNNLDHSLELAVTDQLTGLHNRRYMTGQLDSLVKR
ATLGGDPVSALLIDIDFFKKINDTFGHDIGDEVLREFALRLASNVRAIDL
PCRYGGEEFVVIMPDTALADALRIAERIRMHVSGSPFTVAHGREMLNVTI
SIGVSATAGEGDTPEALLKRADEGVYQAKASGRNAVVGKAA
Ligand information
Ligand IDMG
InChIInChI=1S/Mg/q+2
InChIKeyJLVVSXFLKOJNIY-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Mg+2]
CACTVS 3.341[Mg++]
FormulaMg
NameMAGNESIUM ION
ChEMBL
DrugBankDB01378
ZINC
PDB chain2wb4 Chain B Residue 502 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB2wb4 Crystal Structure of Activated Pled, Identification of Dimerization and Catalysis Relevant Regulatory Mechanisms
Resolution2.8 Å
Binding residue
(original residue number in PDB)		D10 D53 M55
Binding residue
(residue number reindexed from 1)		D9 D52 M54
Annotation score1
Enzymatic activity
Enzyme Commision number 2.7.7.65: diguanylate cyclase.
Gene Ontology
Molecular Function
GO:0005525 GTP binding
GO:0016740 transferase activity
GO:0046872 metal ion binding
GO:0052621 diguanylate cyclase activity
Biological Process
GO:0000160 phosphorelay signal transduction system
GO:0030154 cell differentiation
GO:0043709 cell adhesion involved in single-species biofilm formation
GO:1902201 negative regulation of bacterial-type flagellum-dependent cell motility
Cellular Component
GO:0005737 cytoplasm
GO:0005886 plasma membrane

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:2wb4, PDBe:2wb4, PDBj:2wb4
PDBsum2wb4
PubMed
UniProtB8GZM2|PLED_CAUVN Response regulator PleD (Gene Name=pleD)

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