Structure of PDB 2vzr Chain B Binding Site BS03

Receptor Information
>2vzr Chain B (length=126) Species: 31958 (Amycolatopsis orientalis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
DPVDYQAEDATIVQGAVESNHAGYTGTGFVNYDNVAGSSVEWTVTVPSAG
TYDVVVRYANGTTTSRPLDFSVNGSISASGVAFGSTGTWPAWTTKTVRVT
LAAGVNKIKAVATTANGGPNVDKITL
Ligand information
Ligand IDCA
InChIInChI=1S/Ca/q+2
InChIKeyBHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Ca+2]
FormulaCa
NameCALCIUM ION
ChEMBL
DrugBankDB14577
ZINC
PDB chain2vzr Chain B Residue 1132 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB2vzr Evidence that Family 35 Carbohydrate Binding Modules Display Conserved Specificity But Divergent Function.
Resolution1.95 Å
Binding residue
(original residue number in PDB)
N32 Y33 N35
Binding residue
(residue number reindexed from 1)
N31 Y32 N34
Annotation score4
Enzymatic activity
Enzyme Commision number 3.2.1.165: exo-1,4-beta-D-glucosaminidase.
Gene Ontology
Molecular Function
GO:0030246 carbohydrate binding

View graph for
Molecular Function
External links
PDB RCSB:2vzr, PDBe:2vzr, PDBj:2vzr
PDBsum2vzr
PubMed19218457
UniProtQ56F26|EBDG_AMYOR Exo-beta-D-glucosaminidase (Gene Name=csxA)

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