Structure of PDB 2vbl Chain B Binding Site BS03
Receptor Information
>2vbl Chain B (length=152) Species:
3055
(Chlamydomonas reinhardtii) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
NTKYNKEFLLYLAGFVDADGSIIAQIAPNQSSKFKHRLKLTFQVTQKTQR
RWFLDKLVDEIGVGYVRGSGSVSNYILSEIKPLHNFLTQLQPFLKLKQKQ
ANLVLKIIEQLPSAKESPDKFLEVCTWVDQIAALNDSKTRKTTSETVRAV
LD
Ligand information
>2vbl Chain S (length=10) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
aaaaggcaga
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
2vbl
Molecular Basis of Xeroderma Pigmentosum Group C DNA Recognition by Engineered Meganucleases
Resolution
1.8 Å
Binding residue
(original residue number in PDB)
A19 D20 S22 I24 Q26 K40 Q44 N136 D137 S138 T140 R141 K142
Binding residue
(residue number reindexed from 1)
A18 D19 S21 I23 Q25 K39 Q43 N135 D136 S137 T139 R140 K141
Enzymatic activity
Catalytic site (original residue number in PDB)
A19 D20
Catalytic site (residue number reindexed from 1)
A18 D19
Enzyme Commision number
3.1.-.-
Gene Ontology
Molecular Function
GO:0004519
endonuclease activity
GO:0042802
identical protein binding
GO:0046872
metal ion binding
Biological Process
GO:0006314
intron homing
Cellular Component
GO:0009507
chloroplast
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:2vbl
,
PDBe:2vbl
,
PDBj:2vbl
PDBsum
2vbl
PubMed
18987743
UniProt
P05725
|DNE1_CHLRE DNA endonuclease I-CreI
[
Back to BioLiP
]