Structure of PDB 2ok7 Chain B Binding Site BS03
Receptor Information
>2ok7 Chain B (length=261) Species:
36329
(Plasmodium falciparum 3D7) [
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NFINLYTVKNPLKCKIVDKINLVRPNSPNEVYHLEINHNGLFKYLEGHTC
GIIPYYNKKQRCARLYSISSSNNMENLSVAIKIHKYETNYGYCSGFIKNL
KINDDIYLTGAHGYFNLPNDAIQKNTNFIFIATGTGISPYISFLKKLFAY
DKNNLYNRYTGYITIYYGVYNEDSILYLNELEYFQKMYPNNINIHYVFSY
KQNSDATSFYVQDEIYKRKTEFLNLFNNYKCELYICGHKSIRYKVMDILK
KKKKRVHVEVY
Ligand information
Ligand ID
A2P
InChI
InChI=1S/C10H15N5O10P2/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(25-27(20,21)22)6(16)4(24-10)1-23-26(17,18)19/h2-4,6-7,10,16H,1H2,(H2,11,12,13)(H2,17,18,19)(H2,20,21,22)/t4-,6-,7-,10-/m1/s1
InChIKey
AEOBEOJCBAYXBA-KQYNXXCUSA-N
SMILES
Software
SMILES
CACTVS 3.341
Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P](O)(O)=O)[C@@H](O)[C@H]3O[P](O)(O)=O
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)O)O)OP(=O)(O)O)N
CACTVS 3.341
Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(O)=O)[CH](O)[CH]3O[P](O)(O)=O
ACDLabs 10.04
O=P(O)(O)OCC3OC(n2cnc1c(ncnc12)N)C(OP(=O)(O)O)C3O
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)COP(=O)(O)O)O)OP(=O)(O)O)N
Formula
C10 H15 N5 O10 P2
Name
ADENOSINE-2'-5'-DIPHOSPHATE
ChEMBL
CHEMBL1161861
DrugBank
DB02098
ZINC
ZINC000004096223
PDB chain
2ok7 Chain B Residue 416 [
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Receptor-Ligand Complex Structure
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PDB
2ok7
Ferredoxin-NADP(+) Reductase from Plasmodium falciparum Undergoes NADP(+)-dependent Dimerization and Inactivation: Functional and Crystallographic Analysis.
Resolution
2.7 Å
Binding residue
(original residue number in PDB)
T178 G179 V217 Y218 S247 Y258 Q260 S288
Binding residue
(residue number reindexed from 1)
T133 G134 V169 Y170 S199 Y210 Q212 S240
Annotation score
3
Enzymatic activity
Catalytic site (original residue number in PDB)
Y103 S104 C284 E314 Y316
Catalytic site (residue number reindexed from 1)
Y66 S67 C236 E259 Y261
Enzyme Commision number
1.18.1.2
: ferredoxin--NADP(+) reductase.
Gene Ontology
Molecular Function
GO:0016491
oxidoreductase activity
View graph for
Molecular Function
External links
PDB
RCSB:2ok7
,
PDBe:2ok7
,
PDBj:2ok7
PDBsum
2ok7
PubMed
17258767
UniProt
C6KT68
|FENR_PLAF7 Ferredoxin--NADP reductase, apicoplast (Gene Name=FNR)
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