Structure of PDB 2ivk Chain B Binding Site BS03

Receptor Information

>2ivk Chain B (length=213) Species: 672 (Vibrio vulnificus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

APPSSFSAAKQQAVKIYQDHPISFYCGCDIEWQGKKGIPNLETCGYQVRK
QQTRASRIEWEAVVPAWQFGHHRQCWQKGGRKNCSKNDQQFRLMEADLHN
LTPAIGEVNGDRSNFNFSQWNGVDGVSYGRCEMQVNFKQRKVMPPDRARG
SIARTYLYMSQEYGFQLSKQQQQLMQAWNKSYPVDEWECTRDDRIAKIQG
NHNPFVQQSCQTQ

Ligand information

>2ivk Chain J (length=16) [Search DNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

gaattcgatcgaattc

Receptor-Ligand Complex Structure

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Structure summary

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PDB	2ivk Structural Basis for Sequence-Dependent DNA Cleavage by Nonspecific Endonucleases.
Resolution	2.9 Å
Binding residue (original residue number in PDB)	K28 K54 E77
Binding residue (residue number reindexed from 1)	K10 K36 E59

Enzymatic activity

Enzyme Commision number

3.1.-.-

Gene Ontology

	Molecular Function
GO:0004518	nuclease activity
GO:0004519	endonuclease activity
GO:0046872	metal ion binding

View graph for
Molecular Function

External links

PDB	RCSB:2ivk, PDBe:2ivk, PDBj:2ivk
PDBsum	2ivk
PubMed	17175542
UniProt	Q7MHK3

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