Structure of PDB 2d0w Chain B Binding Site BS03
Receptor Information
>2d0w Chain B (length=168) Species:
53399
(Hyphomicrobium denitrificans) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
AQEVFRNTVTGEALDVEGQAPKEGRDTPAVKQFMQTGVDPYVEVAGCLPK
GEEIYLESCSGCHGHIGEGKVGPGLNDSYWTYPKNTTDKGLFETIFGGAN
GMMGPHGQDLELDNMLKLIAWIRHIQKDDVADADWLSDEQKKNFKPFDIK
AWEATGKAAAEKAQCKIS
Ligand information
Ligand ID
ZN
InChI
InChI=1S/Zn/q+2
InChIKey
PTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
Software
SMILES
CACTVS 3.341
[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Zn+2]
Formula
Zn
Name
ZINC ION
ChEMBL
CHEMBL1236970
DrugBank
DB14532
ZINC
PDB chain
2d0w Chain B Residue 1218 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
2d0w
Crystal structures of cytochrome c(L) and methanol dehydrogenase from Hyphomicrobium denitrificans: structural and mechanistic insights into interactions between the two proteins
Resolution
1.98 Å
Binding residue
(original residue number in PDB)
H106 D109
Binding residue
(residue number reindexed from 1)
H106 D109
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0005506
iron ion binding
GO:0009055
electron transfer activity
GO:0020037
heme binding
Cellular Component
GO:0042597
periplasmic space
View graph for
Molecular Function
View graph for
Cellular Component
External links
PDB
RCSB:2d0w
,
PDBe:2d0w
,
PDBj:2d0w
PDBsum
2d0w
PubMed
16533029
UniProt
Q4AE24
[
Back to BioLiP
]