Structure of PDB 1z84 Chain B Binding Site BS03

Receptor Information
>1z84 Chain B (length=305) Species: 3702 (Arabidopsis thaliana) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
QSPELRKDPVTNRWVIFSPTDFKSSCPFCIGREQECAPELFRVPDHDPNW
KLRVIENLYPALSRNLETQSRTIVGFGFHDVVIESPVHSIQLSDIDPVGI
GDILIAYKKRINQIAQHDSINYIQVFKNQGASAGASMSHSHSQMMALPVV
PPTVSSRLDGTKDYFEETGKCCLCEAKSKHFVIDESSHFVSVAPFAATYP
FEIWIIPKDHSSHFHHLDDVKAVDLGGLLKLMLQKIAKQLNDPPYNYMIH
TSPLKVTESQLPYTHWFLQIVPQLSGVGGFEIGTGCYINPVFPEDVAKVM
REVSL
Ligand information
Ligand IDAMP
InChIInChI=1S/C10H14N5O7P/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(22-10)1-21-23(18,19)20/h2-4,6-7,10,16-17H,1H2,(H2,11,12,13)(H2,18,19,20)/t4-,6-,7-,10-/m1/s1
InChIKeyUDMBCSSLTHHNCD-KQYNXXCUSA-N
SMILES
SoftwareSMILES
CACTVS 3.370Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(O)=O)[CH](O)[CH]3O
CACTVS 3.370Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P](O)(O)=O)[C@@H](O)[C@H]3O
OpenEye OEToolkits 1.7.6c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)COP(=O)(O)O)O)O)N
ACDLabs 12.01O=P(O)(O)OCC3OC(n2cnc1c(ncnc12)N)C(O)C3O
OpenEye OEToolkits 1.7.6c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)O)O)O)N
FormulaC10 H14 N5 O7 P
NameADENOSINE MONOPHOSPHATE
ChEMBLCHEMBL752
DrugBankDB00131
ZINCZINC000003860156
PDB chain1z84 Chain B Residue 602 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB1z84 Structure and Mechanism of an ADP-Glucose Phosphorylase from Arabidopsis thaliana
Resolution1.83 Å
Binding residue
(original residue number in PDB)		F65 N94 L95 Y96 N173 A180 S181 M182 H186 Q188
Binding residue
(residue number reindexed from 1)		F28 N57 L58 Y59 N128 A135 S136 M137 H141 Q143
Annotation score4
Enzymatic activity
Catalytic site (original residue number in PDB) C63 C66 H133 N173 S181 H184 H186 Q188
Catalytic site (residue number reindexed from 1) C26 C29 H88 N128 S136 H139 H141 Q143
Enzyme Commision number 2.7.7.-
Gene Ontology
Molecular Function
GO:0008108 UDP-glucose:hexose-1-phosphate uridylyltransferase activity
GO:0008270 zinc ion binding
GO:0016779 nucleotidyltransferase activity
GO:0017103 UTP:galactose-1-phosphate uridylyltransferase activity
GO:0043531 ADP binding
GO:0046872 metal ion binding
GO:0047345 ribose-5-phosphate adenylyltransferase activity
Biological Process
GO:0005975 carbohydrate metabolic process
GO:0006006 glucose metabolic process
GO:0006012 galactose metabolic process
GO:0080040 positive regulation of cellular response to phosphate starvation

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Molecular Function
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Biological Process
External links
PDB RCSB:1z84, PDBe:1z84, PDBj:1z84
PDBsum1z84
PubMed16519510
UniProtQ9FK51|AGLUP_ARATH ADP-glucose phosphorylase (Gene Name=At5g18200)

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