Structure of PDB 1tdq Chain B Binding Site BS03

Receptor Information
>1tdq Chain B (length=126) Species: 10116 (Rattus norvegicus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
EQCEEGWTKFQGHCYRHFPDRETWVDAERRCREQQSHLSSIVTPEEQEFV
NKNAQDYQWIGLNDRTIEGDFRWSDGHSLQFEKWRPNQPDNFFATGEDCV
VMIWHERGEWNDVPCNYQLPFTCKKG
Ligand information
Ligand IDCA
InChIInChI=1S/Ca/q+2
InChIKeyBHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Ca+2]
FormulaCa
NameCALCIUM ION
ChEMBL
DrugBankDB14577
ZINC
PDB chain1tdq Chain B Residue 129 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB1tdq Structural basis for interactions between tenascins and lectican C-type lectin domains: evidence for a crosslinking role for tenascins
Resolution2.6 Å
Binding residue
(original residue number in PDB)		E68 D98
Binding residue
(residue number reindexed from 1)		E68 D98
Annotation score4
Enzymatic activity
Enzyme Commision number ?
External links
PDB RCSB:1tdq, PDBe:1tdq, PDBj:1tdq
PDBsum1tdq
PubMed15296743
UniProtP07897|PGCA_RAT Aggrecan core protein (Gene Name=Acan)

[Back to BioLiP]