Structure of PDB 1ibq Chain B Binding Site BS03
Receptor Information
>1ibq Chain B (length=325) Species:
5063
(Aspergillus phoenicis) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
SKGSAVTTPQNNDEEYLTPVTVGKSTLHLDFDTGSADLWVFSDELPSSEQ
TGHDLYTPSSSATKLSGYSWDISYGDGSSASGDVYRDTVTVGGVTTNKQA
VEAASKISSEFVQDTANDGLLGLAFSSINTVQPKAQTTFFDTVKSQLDSP
LFAVQLKHDAPGVYDFGYIDDSKYTGSITYTDADSSQGYWGFSTDGYSIG
DGSSSSSGFSAIADTGTTLILLDDEIVSAYYEQVSGAQESYEAGGYVFSC
STDLPDFTVVIGDYKAVVPGKYINYAPVSTGSSTCYGGIQSNSGLGLSIL
GDVFLKSQYVVFNSEGPKLGFAAQA
Ligand information
Ligand ID
ZN
InChI
InChI=1S/Zn/q+2
InChIKey
PTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
Software
SMILES
CACTVS 3.341
[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Zn+2]
Formula
Zn
Name
ZINC ION
ChEMBL
CHEMBL1236970
DrugBank
DB14532
ZINC
PDB chain
1ibq Chain B Residue 1454 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
1ibq
Structure of aspergillopepsin I from Aspergillus phoenicis: variations of the S1'-S2 subsite in aspartic proteinases.
Resolution
2.14 Å
Binding residue
(original residue number in PDB)
S1 D148
Binding residue
(residue number reindexed from 1)
S1 D148
Annotation score
4
Enzymatic activity
Catalytic site (original residue number in PDB)
D32 S35 D37 W39 Y74 D214 T217
Catalytic site (residue number reindexed from 1)
D32 S35 D37 W39 Y74 D214 T217
Enzyme Commision number
3.4.23.18
: aspergillopepsin I.
Gene Ontology
Molecular Function
GO:0004190
aspartic-type endopeptidase activity
Biological Process
GO:0006508
proteolysis
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:1ibq
,
PDBe:1ibq
,
PDBj:1ibq
PDBsum
1ibq
PubMed
11418762
UniProt
Q12567
|PEPA_ASPPH Aspergillopepsin-1 (Gene Name=pepA)
[
Back to BioLiP
]