Structure of PDB 6yrv Chain AAA Binding Site BS03

Receptor Information
>6yrv Chain AAA (length=573) Species: 554065 (Chlorella variabilis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SPVAGQKYDYILVGGGTAACVLANRLSADGSKRVLVLEAGPDNTSRDVKI
PAAITRLFRSPLDWNLFSELQEQLAERQIYMARGRLLGGSSATNATLYHR
GAAGDYDAWGVEGWSSEDVLSWFVQAETNADFGPGAYHGSGGPMRVENPR
YTNKQLHTAFFKAAEEVGLTPNSDFNDWSHDHAGYGTFQVMQDKGTRADM
YRQYLKPVLGRRNLQVLTGAAVTKVNIDQAAGKAQALGVEFSTDGPTGER
LSAELAPGGEVIMCAGAVHTPFLLKHSGVGPSAELKEFGIPVVSNLAGVG
QNLQDQPACLTAAPVKEKYDGIAISDHIYNEKGQIRKRAIASYLLGGRGG
LTSTGCDRGAFVRTAGQALPDLQVRFVPGMALDPDGVSTYVRFAKFQSQG
LKWPSGITMQLIACRPQSTGSVGLKSADPFAPPKLSPGYLTDKDGADLAT
LRKGIHWARDVARSSALSEYLDGELFPGSGVVSDDQIDEYIRRSIHSSNA
ITGTCKMGNAGDSSSVVDNQLRVHGVEGLRVVDASVVPKIPGGQTGAPVV
MIAERAAALLTGKATIGASAAAP
Ligand information
Ligand IDCO2
InChIInChI=1S/CO2/c2-1-3
InChIKeyCURLTUGMZLYLDI-UHFFFAOYSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.5.0C(=O)=O
ACDLabs 10.04
CACTVS 3.341		O=C=O
FormulaC O2
NameCARBON DIOXIDE
ChEMBLCHEMBL1231871
DrugBankDB09157
ZINC
PDB chain6yrv Chain AAA Residue 803 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB6yrv Mechanism and dynamics of fatty acid photodecarboxylase.
Resolution1.94 Å
Binding residue
(original residue number in PDB)		R451 N575
Binding residue
(residue number reindexed from 1)		R375 N499
Annotation score5
Enzymatic activity
Enzyme Commision number 4.1.1.106: fatty acid photodecarboxylase.
Gene Ontology
Molecular Function
GO:0016614 oxidoreductase activity, acting on CH-OH group of donors
GO:0050660 flavin adenine dinucleotide binding

View graph for
Molecular Function
External links
PDB RCSB:6yrv, PDBe:6yrv, PDBj:6yrv
PDBsum6yrv
PubMed33833098
UniProtA0A248QE08|FAP_CHLVA Fatty acid photodecarboxylase, chloroplastic (Gene Name=FAP)

[Back to BioLiP]