Structure of PDB 8q4d Chain A Binding Site BS03

Receptor Information
>8q4d Chain A (length=352) Species: 1422 (Geobacillus stearothermophilus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MITRGEFFMIKEMYERGMSISDIARELGIDRKTVRKYIHSPNPPSKSKRK
QRKSKLDPFKPYLQKRMLEDGVFNSEKLFFEIRQQGYTGGKTILKDYMKP
FRETAKKKYTVRYETLPGEQMQVDWKEVGEVVIEGKKVKLSLFVATLGYS
RMKYAVFTTSQDQEHLMECLIQSFKYFGGVPKKVLFDNMKTVTDGREQGV
VKWNQRFSEFASYYGFIPKVCRPYRAQTKGKVERAIQYIMDHFYVGTAFE
SIEELNFLLHRWLDQVANRKPNATTGISPQERWAEESLKPLPLKDYDTSY
LSYRKVHWDGSFSYKGEQWLLSAEYAGKEILVKERLNGDIRLYFRGEEIS
HV
Ligand information
>8q4d Chain c (length=58) [Search DNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
agttggccgcagtgttatcactcatggttatggcagcactgcataattct
cttactgt
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8q4d Molecular basis for transposase activation by a dedicated AAA+ ATPase.
Resolution3.62 Å
Binding residue
(original residue number in PDB)		D187 N188 K190 Y224
Binding residue
(residue number reindexed from 1)		D187 N188 K190 Y224
Gene Ontology
Biological Process
GO:0006310 DNA recombination
GO:0032196 transposition

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Molecular Function
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Biological Process
External links
PDB RCSB:8q4d, PDBe:8q4d, PDBj:8q4d
PDBsum8q4d
PubMed38926614
UniProtQ45618|TRA6_GEOSE Putative transposase for insertion sequence element IS5376

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