Structure of PDB 8d1v Chain A Binding Site BS03

Receptor Information
>8d1v Chain A (length=1229) Species: 45657 (Desulfonema ishimotonii) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MTTTMKISIEFLEPFRMTKWQESTRRNKNNKEFVRGQAFARWHRNKKDNT
KGRPYITGTLLRSAVIRSAENLLTLSDGKISEKTCCPGKFDTEDKDRLLQ
LRQRSTLRWTDKNPCPDNAETYCPFCELLGRSGKDWRFRIHFGNLSLPGK
PDFDGPKAIGSQRVLNRVDFKSGKAHDFFKAYEVDHTRFPRFEGEITIDN
KVSAEARKLLCDSLKFTDRLCGALCVIRFDPNANLAEKTAEQIISILDDN
KKTEYTRLLADAIRSLRRSSKLVAGLPKDHDGKDDHYLWDIGKKKKDENS
VTIRQILTTSADTKELKNAGKWREFCEKLGEALYLKSKDMFHGKPDRLEK
SRSVSIGSVLKETVVCGELVAKTPFFFGAIDEDAKQTDLQVLLTPDNKYR
LPRSAVRGILRRDLQTYFDSPCNAELGGRPCMCKTCRIMRGITVMDARSE
YNAPPEIRHRTRINPFTGTVAEGALFNMEVAPEGIVFPFQLRYRGSEDGL
PDALKTVLKWWAEGQAFMSGAASTGKGRFRMENAKYETLDLSDENQRNDY
LKNWGWRDEKGLEELKKRLNSGLPEPGNYRDPKWHEINVSIEMASPFING
DPIRAAVDKRGTDVVTFVKYKAEGEEAKPVCAYKAESFRGVIRSAVARIH
MEDGVPLTELTHSDCECLLCQIFGSEYEAGKIRFEDLVFESDPEPVTFDH
VAIDRFTGGAADKKKFDDSPLPGSPARPLMLKGSFWIRRDVLEDEEYCKA
LGKALADVNNGLYPLGGKSAIGYGQVKSLGIKGDDKRISRLMNPAFDETD
VAVPEKPKTDAEVRIEAEKVYYPHYFVEPHKKVEREEKPCGHQKFHEGRL
TGKIRCKLITKTPLIVPDTSNDDFFRPADKEARKEKDEYHKSYAFFRLHK
QIMIPGSELRGMVSSVYETVTNSCFRIFDETKRLSWRVDDRMIGKRMSAD
LRPCHGDEKRLLLRHPKGLCPACRLFGTGSYKGRVRFGFASLENDPEWLI
PGKNPGDPFHGGPVMLSLLERPRPTWSIPGSDNKFKVPGRKFYVHHHAWK
TIKDGNHPTTGKAIEQSPNNRTVEALAGGNSFSFEIAFENLKEWELGLLI
HSLQLEKGLAHKLGMAKSMGFGSVEIDVESVRLRKDWKQWRNGNSEIPNW
LGKGFAKLKEWFRDELDFIENLKKLLWFPEGDQAPRVCYPMLRKKDDPNG
NSGYEELKDGEFKKEDRQKKLTTPWTPWA
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain8d1v Chain A Residue 1701 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8d1v Molecular mechanism of active Cas7-11 in processing CRISPR RNA and interfering target RNA.
Resolution2.82 Å
Binding residue
(original residue number in PDB)		C965 C1312 C1342 C1345
Binding residue
(residue number reindexed from 1)		C924 C954 C970 C973
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Biological Process
GO:0051607 defense response to virus

View graph for
Biological Process
External links
PDB RCSB:8d1v, PDBe:8d1v, PDBj:8d1v
PDBsum8d1v
PubMed36190192
UniProtA0A401FT36

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